Strain | Pseudomonas sp. CF150 soap_scaffs_150.Contig73.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTGGTGCTGACTGGCAACGGCAAAGGCAAGAGCAGTTCGGCGTTCGGCATGTTGGCCCGGGCCATGGGCCATGGCATGCAGTGCGGTGTGGTGCAGTTCA TCAAGGGGCGTAACAGCACCGGCGAAGAATTGTTTTTTCGCCGCTTCCCCGAGCAGGTGCGCTTTCACGTGATGGGCGAAGGTTTCACCTGGGAAACCCA GGATCGCCAGCGCGATATCGCCGCTGCCGAAGCGGCTTGGGCAGTGTCCCGGGCCATGTTGAATGACCCTTCCATCGGCTTGGTGGTGCTGGATGAACTG AACATCGCCCTCAAGCACGGTTACCTTGACCTGGACCAGGTACTCAGCGACCTGCAAGCCCGCCCGCCCATGCAGCATGTGGTGGTCACCGGCCGTGGCG CCAAGCCTGAGCTGATCGAAATGGGCGACACCGTCACCGAAATGGGCATGCTCAAGCACGCGTTCCAGGCCGGTATCAAGGCACAGAAAGGCGTCGAACT
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DNA Sequence for Gene |
>CF150_21766
TTGAATCAGCCCCGTCATTGCCCGGCCGTACTGATCGCCGCTCCGGCGTCCGGCCAGGGCAAAACCACGGTCACCGCCGCGTTGGCGCGTTTGCACCGCA ACCTGGGGCGCAAGGTGCGCGTGTTCAAATGCGGGCCGGACTTTCTCGACCCGATGATCCACGAGCGTGCCAGTGGCGCGCCGGTGTACCAGTTGGACAT GTGGATGGTGGGCGAGCAGGAAAGCCGCCGCCTGCTCTGGGAGGCCGCGGGGGAGGCCGACCTGATCCTCATCGAAGGCGTGATGGGCCTGTTCGACGGC ACGCCTTCCAGCGCTGACTTGGCGCGGCACTTCGGTGTACCGGTGCTGGGCGTGATCGATGGCACGGCTATGGCCCAGACGTTCGGCGCCCTGGCCCTGG GGCTGGCGCGCTATCAGCCCGACCTGCCGTTCGCCGGCGTGCTGGCCAATCGCGTCGGCACCCTGCGCCATGCGCAATTGCTTGAAGGCAGCCTCACTGA GGGCTTGCGTTGGTACGGTGCATTGTCCCGCGAGACCGGCATCGAACTGCCCAGCCGCCACCTGGGCCTGGTGCAAGCCAGCGAACTGAATGACCTTGAT ATACGCCTGGATGCCGCCGCCCAGGCGTTGGGCAGCAGTTGCGAAGTGGCCCTGCCGCCGCCGGTGACCTTTGCCGCGCCGCACGTGATCGAAACCGAAC CCTTGCTGGCCGGTGTGCGGATTGCCGTGGCCCGTGACGAAGCCTTTGCTTTTACCTACGGCGCCAGCCTGGATCTGTTGCGGGCAATGGGCGCGGAGCT GAAGTTCTTCTCACCGATCCATGATCGCCAATTGCCTGAAGCGGACAGCCTCTATTTGCCCGGCGGGTATCCGGAACTGCACCACCAGGCATTGTCGGCC AATACCTCGATGCTGGACGCCATTCGTGCTCATTACGCCGCTGGCAAACCGCTGCTCGCCGAATGCGGTGGCATGCTCTATCTGCTCGACTCGTTGACCG ATGTGGAGGGTGAGCGCGCCGAACTGGTTGGCTTGTTGCAAGGCGATGCGGTGATGCAGAAGAAACTCGCGGCCCTGGCGCTGCAAAGCGTCGAGCTGCC GGAGGGGACCTTGCGTGGGCATACCTATCACCATTCCCTGACCAGTACCGAATGGGCGCCGATTGCCCGTGGCCTGAGCCCTAACGGCGGGCGCGGAGCT GAAGCGGTTTACCGACAGGGTCGTTTGACCGCCTCCTATGTGCACTTTTATTTTCCGTCGAATCCTGGCGCGGTGGCCGCGTTGTTTGCGCCCGACCTTG AGACCGCTATCGCAGGCAAGCCAGCTCCCACAGTTGACCCAGTTGCAAACCAATCCAATGTGGGAGCGGGCTTGCTCGCGAAGAGGCCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CTGACAACGCTTTCCCCCAAGCCGACCGCGAAGCCGTCTACCGCGCCATCGCCGAACGCCGCGACATGCGCCACTTCCGCGGTGGCAGCGTCGCGCCTGA ACTGCTGCAGCGCCTGCTCCACGCCGCGCACCAGGCGCCCAGCGTCGGCCTGATGCAGCCGTGGCGTTTTATCCGCATCAGCGATCGCTCGTTGCGCAGC CAGATTCAACAGTTGGTAGAAGAAGAGCGCGTACGCACCGCCGAAGCATTGGGCGAGCGCTCCGATGCGTTCATGAAGCTCAAGGTCGAAGGCATCAACG ATTGTGCCGAGGTATTGGTCGCCGCCTTGATGGACGATCGCGAGCGCCACATCTTCGGGCGCCGCACCCTGCCGGAAATGGACATGGCCTCGCTCTCCTG CGCCATCCAGAACCTGTGGCTGGCGGCGCGCGTGGAAGGGTTGGGCATGGGCTGGGTTTCGCTGTTCGACCCCCAGGCCCTGGCCGAGTTGCTGGGTTTG
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Amino Acid Sequence |
>cobyrinic acid a,c-diamide synthase
MNQPRHCPAVLIAAPASGQGKTTVTAALARLHRNLGRKVRVFKCGPDFLDPMIHERASGAPVYQLDMWMVGEQESRRLLWEAAGEADLILIEGVMGLFDG TPSSADLARHFGVPVLGVIDGTAMAQTFGALALGLARYQPDLPFAGVLANRVGTLRHAQLLEGSLTEGLRWYGALSRETGIELPSRHLGLVQASELNDLD IRLDAAAQALGSSCEVALPPPVTFAAPHVIETEPLLAGVRIAVARDEAFAFTYGASLDLLRAMGAELKFFSPIHDRQLPEADSLYLPGGYPELHHQALSA NTSMLDAIRAHYAAGKPLLAECGGMLYLLDSLTDVEGERAELVGLLQGDAVMQKKLAALALQSVELPEGTLRGHTYHHSLTSTEWAPIARGLSPNGGRGA EAVYRQGRLTASYVHFYFPSNPGAVAALFAPDLETAIAGKPAPTVDPVANQSNVGAGLLAKRP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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