Pseudomonas sp. CF150, CF150_18188 (mdoG)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. CF150 soap_scaffs_150.Contig61.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TACGGCCCAGCTTCTCCACAGCGGCTCCTCCGACCCTGGGAGCGGCGCTTTTTGAGCACTTGTTGTTACAAGCGCAACAATTGCATGGCAAGGTGGCTTC GGGGCGTTTTGGCGCGGATATGCAGGTGCACTTGGTCAATGATGGCCCTGTGACCTTCCTCTTACAGACATGAATGTATGAAAAACGACGTTAATGCCTA AAAACGCAGGGTTTCGCTACAAATACTTCACTGTCCCTGATGCGTTGTCTCGCGGGCTACTAGATAATCGCGCGCTACGGGGATCAGCGTTGTTTGGTCC ATTTTTGACTTAGGTAGAGCCTTGTCCGACAACCGCATGGGGAATCATTTTGCCCCAGAGGAGTCGGAACATTGCTCGCCAACCTGGCATATAGATAGCT GGCCGTTGGTTTTTTGATCTGTTTTCGGCGAGGGTTGCTCGTGATTGTTAGTCCCTGTAATGCACCAAAATTGTCTGCCAAACGGTTACGAAACGCACTG
|
|
| DNA Sequence for Gene |
>CF150_18188
|mdoG
GTGACGGGCTCTGCCCTGTTTTGCCTGTTCGGCGCGGGTCAACTGTGGGCGTTCAGTCTGGATGATGTGTCGGCCAAGGCAAAAGAGCTGGCTGGGCAGA AGTACGAAGCTCCGCGCAGCAATCTGCCGAACGAATTCCGCGAAATGAAATTTGCGGATTACCAGAAAATTCGTTTCCGCAATGAAAAAGCCGAGTGGGC CGATCAGAACACCCCGTTCAAGCTGTCCTTCTATCACCAGGGGATGCATTTCGACACCCCGGTGAAAATCAACGAAGTCACCGCCGATAGCGTGCACGAA ATCAAGTACGACCCGACGCGTTTCGATTTCGGCGACGTGAAATTTGATCCTAAAGCCACCGAACAGCTGGGTTACGCCGGTTTCCGTGTGCTTTTCCCGA TCAACAAGGCCGACAAGCAAGACGAAATCATGACCATGCTCGGCGCCAGCTATTTCCGCGTCGTAGGCAAGGACCAAGTGTATGGCCTGTCTGCCCGTGG CATGGCAATCGACACCGCGTTGCCGTCTGGCGAAGAATTCCCGCGTTTCACCGAGTTCTGGATCGAGCGTCCAAAGCCGGGTGACAAGCATTTGGTGATT TTCGCGCTACTGGATTCGCCACGCGCCACTGGCGCTTATCGTCTGATCCTGCGCCCTGGCACCGACACCGTGGTGGACGTCAAATCCCAGATGTACCTGC GTGACAAGGTCAGCAAGCTGGGCGTTGCGCCGTTGACCTCGATGTTCCTGTTCGGCGCCAACCAGCCGTCCAAGGTCCTCAACTACCGTCGCGAGCTCCA CGATTCCAGCGGCCTGTCGATTCACGCCGGCAATGGCGAGTGGATCTGGCGTCCGCTGAACAACCCTAAACACCTGTCGGTCAGCAACTTCAGCGTCGAG AACCCGCGTGGGTTCGGCCTGCTGCAGCGTGGCCGCAACTTCAGCCACTACGAAGACCTGGACGACAACTACGACAAGCGCCCAAGCGCCTGGATCGAGC CTGAAGGTGACTGGGGCAAAGGCTCCGTCGACCTGGTCGAGATTCCGACCGCCGATGAGACCAACGACAATATCGTGGCCTTCTGGAGCCCGGCCGAGCT GCCGGAAGTCGGCAAGCCGCTGGACGTGGCTTACCGTCTGCACTGGACATTGGACGACGCGGCCTTCCATTCGCCGGACAGTGCCTGGGTCAAGCAGACC CTGCGTTCTACCGGTGACGTGAAGCAATCGAACCTGATCCGTCAGCCCGATGGCAGCGTGGCCTACCTGGTAGATTTCGAGGGCCCGTCCCTGAAGAAAC TGCTGCCGGACGCTCCGGTACGTAGCCAGGTGAGCGTGGGTGATAACGCTGAACTGGTCGAAAACAGCGTGCGCTACAACGAACACACCAAAGGCTGGCG CCTGACCCTGCGTATGAAGATCAAGGACGCAAGCAAACCGACCGAAATGCGTGCGGCATTGGTGCAGGATATCGTGCAGCCTGAGCCTGAGTCGGTTTCC AACCATGTGCTCAAGGCCGACAAAGTCTTGGCCAAGCAGCATGAGAAGCAGGCCAAGAAAGACGCCAAGGACAAGGAAGCCAAACAGCCTGAGGCTGCCC CAGCCACACCGGAGCCGATCAAGACCGAGCAAGTCCTGACCGAAACCTGGAGCTATCAGTTGCCTGCCGATGAGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TTCTCAAGTCAAGCCAGAGACTCTGTCCGAGTACCTGGCGCATCTACCCATGACGGCTGAGCAGCGCGCCGAGTTGGCGGGCTGCAAGTCCTTCAGCGAG TTGCACGAACGTCTGTCGTCCAAGACCTTCGACGCACCGATCGACGCTGCCCAAGCGTCGGTCGGCCGCCGCTTGACCCTCAACAGCGCCGAAGAGCTGC AAGACGCCGAGATGCTGGCGCTCGATGCCAGCGGTCGTGTGTGTCTCAAGGCCACGCCGCCGATTCGTCGGACCAAAGTGGTGCCCGAGCCTTGGCGCAC CAACATCCTGGTGCGCGGTTGGCGCCGGATGACCGGCCGCACCAACCCGCCCAAGCCACCGAAAGATGAGCGGGTATTGCCGGCTGCGCGCTGGCGTACC GTGGGCTCGATCCGTCGTTATATCCTGCTGGTGCTGATGCTGGGCCAGACCATCGTGGCCGGCTGGTACATGAAAGGCATCATGCCGTACCAGGGCTGGT
|
|
| Amino Acid Sequence |
>glucan biosynthesis protein G
MTGSALFCLFGAGQLWAFSLDDVSAKAKELAGQKYEAPRSNLPNEFREMKFADYQKIRFRNEKAEWADQNTPFKLSFYHQGMHFDTPVKINEVTADSVHE IKYDPTRFDFGDVKFDPKATEQLGYAGFRVLFPINKADKQDEIMTMLGASYFRVVGKDQVYGLSARGMAIDTALPSGEEFPRFTEFWIERPKPGDKHLVI FALLDSPRATGAYRLILRPGTDTVVDVKSQMYLRDKVSKLGVAPLTSMFLFGANQPSKVLNYRRELHDSSGLSIHAGNGEWIWRPLNNPKHLSVSNFSVE NPRGFGLLQRGRNFSHYEDLDDNYDKRPSAWIEPEGDWGKGSVDLVEIPTADETNDNIVAFWSPAELPEVGKPLDVAYRLHWTLDDAAFHSPDSAWVKQT LRSTGDVKQSNLIRQPDGSVAYLVDFEGPSLKKLLPDAPVRSQVSVGDNAELVENSVRYNEHTKGWRLTLRMKIKDASKPTEMRAALVQDIVQPEPESVS NHVLKADKVLAKQHEKQAKKDAKDKEAKQPEAAPATPEPIKTEQVLTETWSYQLPADE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|