Pseudomonas sp. CF150, CF150_16771

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CF150 soap_scaffs_150.Contig56, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCCGCACCCGCACCGATCAAGCCTGCTGGCAGGCGCTGGAAATCGCCCAACTGGATGCTACTGTCAAGGCATTGCCCTTGGGCCTGGACAGCGTGGTCG GGCGTTCGGGGGTGCGCTTTTCCGGTGGCCAGCGGCAACGCCTGGCCATTGCCCGCATGGTGCTCGCCGAGCCTAAAGTGGTGATTCTGGACGAGGCCAC CTCCGCATTGGACGCGGCGACCGAGTACAACCTGCACCAGGCACTGGCGCGGTTTCTCAGCGGGCGTACTACACTCATCATCGCCCACCGGCTGTCTGCG GTGAAGCAGGCTGACCGAGTGCTGGTGTTCGATGGCGGGCACATCGCCGAGGACGGCGACCATCAGCAGTTGATTGCCGATGGCGGGCTGTACGCCAAAC TGTACGGACACTTGCAACAAGTGCGTTGATTTAGCTTAGGCTGTGCTATCGGGAGCGGATTTTCGCGTGCGTATCAAGCTGTGCATGTGTAAGGGACTTC
DNA Sequence for Gene
>CF150_16771
ATGAAGCAAAAGCGGACTCTCGGAACGCCACGCCTGCTGGGTATTGTCTGGCCCTTTATCGCCGTCGTGTTGTTCCAGGCATTGTTAGGCTGCGTCAGTC TCTACGTGCTTTCGGCAGTGCGGGGCTATGTGGCGGGCGAAAGCCTGTGGTCCAAGGGCCAGAAGGATGCCATCTACTACCTGACCCTCTACGCCGATAA CCGCAACGACGCCACCTACCTCAAATACCAGCAGGCCATTGCCGTGCCCCAGGGTGGGCATGAATTGCGCATTGCTCTGGACCGTCCCACCCCCGATACG GACGCGGCCCGCTTGGGCATTCTCAAGGGCGGTAATCATCCGGACGACGTTTCCAGCCTGATCTGGCTATACCTCAACTTCCGTCATTTCAGCTACCTGG AAAAAGCCATTGAGCTGTGGACGGTGGGCGACGGCTACCTCGTGCAGCTCGATGAGCTGGCTCAGGAGATGCACGGCGCCATTACCTCCGGCTACGTCAG CAGTGACGATGTCCATCATTGGAAGGCGCGCATCACGGCCATCAATGAAGGGGTGACGCCCGCTGCCAAGGCGTTCAGCGATGCCCTGGGCGAAGGTTCG CGGATGATCCTGCGCCTGTTGTTGATCACCAACCTGGCGACTGCCTTGGGCCTGATCGTGTTGGCGCTGCTGCGCACCCACAAGCTGCTGGCCCAGCGTC ATGCCTTTGCCGATGCGCTGCAAGCGGAGAAGGAGCGGGCGCAGATCACATTGGAGTCGATTGGCGACGGGGTGATTACCACCGACGTCGACGGGGCCAT TGCCTATATGAACCCTGCAGCCGAAGCGTTGACCCACTGGCGCTCGGAGCAAGCCCAGGGCCTGCCGCTGGCGGCGCTGTTCAAGCTTTTGAATGAAAAC GCCGAGCCCGACGGTTTCACACTGATTGAACACATCGTCAAAGGCCAGTTCAGCGGCGGCAGCGAGCATTCCAAGCTGATCCAGCGCCTGGACGGCAGCA CCGTCTCGGTCACCCTGGTGGGCGCGCCGATCCGCAGTGCCGGCAAGGTCAGCGGTGCGGTCCTGGTGCTGCATGACATGACCCAGGAACGCCAGTACAT CGCCAACCTTTCCTGGCAGGCCACCCACGACGCGTTGACTGGCCTGGCTAACCGTCGCGAGTTCGAGTTCCGCCTTGAACAGGTGCTGCAACAGGTCGCG CGCCAGCAAAGTGGGCGACATGCCTTGATGTTCCTCGACCTCGACCAGTTCAAGCTGGTCAATGACACCTGTGGCCATGCCGCGGGCGATGAACTGCTGC GCCACATCTGCGCGTTGCTGCAGTCGGACCTGCGCGAGGGCGACACCCTGGCTCGGTTGGGCGGCGACGAGTTTGGTATCCTGCTGGAGAACTGCCCGGC GCCGGTGGCGGAAAAAATCGCCGAGAGCCTGCGCCACACTGTGCAGAACTTGCACTTCGTGTGGAAGGGTCGGCCCTTCATGACCACCGTCAGCATCGGC CTGGTGCATATCTCGCAAACCCCGACCACCCTGGAAACCTCCCTGCGTGCCGCCGACATGGCGTGCTACATGGCCAAGGAAAAGGGGCGCAACCGGGTGC AGGTCTACCATGTCGACGACTCGGAGTTGTCTCTGCGGTTTGGCGAGATGGCCTGGGTACAGCGGCTGCATATTGCGCTTGAGGAAGACCGCTTTTGCCT TTACGCCCAGGAAATTGCGCCTTTGGGCCCTACCGACGCCGGCAGTGGGCACATCGAAATTCTCCTGCGCCTGCATGACGAAGCGGGGCGGATCATTTTG CCCAACAGTTTTATTCCGGCGGCCGAACGCTACGGGTTGATGACGTCCCTGGATCGTTGGGTAGTGGAAAACGTATTCAAGATTATCGCCCGTTGCATGC ATGAGCGCCCGGGCCGCCCCATGGCCATGTGTGCGATTAATCTGTCAGGCATAACCATTGGCGATGATGACTTTTTAGGTTTTTTGCGTCAGAAATTCGA TACTTACAACATTCCACCGGAAATGATTTGTTTTGAAATAACTGAAACCAGCGCTATAGCCAATTTGGGCAGCGCGATTCGGTTTATTAATGAACTCAAA GCGTTAGGGTGCCATTTCTCACTCGATGATTTTTGCGCCGGAATGTCCTCATTCGCATATTTGAAACATTTACCTGTAGACTTCCTGAAGATCGATGGAA GTTTCGTAAAGGATATGCTGGACGACCCGATTAACCGCGCCATGGTCGAAGTGATCAACCACATCGGCCACGTCATGGGTAAGCGCACGATTGCCGAGTT TGTTGAAACACCCCAGATCGAACAGGCTTTACTTGAGATAGGTGTGGATTACGCTCAGGGCTACCTGATTGAACGCCCGCAATTGTTTACCTTTGATAGC TTGCAGTGCCGACCTGAGCGGCCGCAGCCACTGTTATTCAAGGCGCCCGGCACTTTCCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AACATTTGCTGGTCTGTACAATCACACTTGAAAAGGAGCCCCACAGTGATCGACACATTCAACAGAACCGGCCCGCTTATGGAAGCCTCCAGTTACCCCG CCTGGGCGCAGCAATTGATCCAGGACTGTAGCGAGAGCAAGCGTCGGGTTGTCGAGCACGAACTGTATCAGCGCATGCGTGACAACGCCCTCAGCGCCAA GACCATGCGCCACTACCTGATTGGTGGTTGGCCGGTGGTGGAACAGTTTGCCTTGTACATGGCGCAGAACCTGACCAAGACCAAGTTTGCCCGTCATCCT GGGGAGGATATGGCGCGCCGTTGGCTCATGCGCAATATCCGCGTGGAGCTCAACCATGCCGACTATTGGGTCAATTGGGCGCGGGCTCACGGCGTCAGCC TTGAAGAACTGCAAGCGCAGGAGGTGCCGCCTGAGTTGCACGCCCTGAGTCATTGGTGCTGGCACACCAGCTCGGCGGATGCGTTGATCGTCGCGATTGC
Amino Acid Sequence
>putative signaling-related membrane protein
MKQKRTLGTPRLLGIVWPFIAVVLFQALLGCVSLYVLSAVRGYVAGESLWSKGQKDAIYYLTLYADNRNDATYLKYQQAIAVPQGGHELRIALDRPTPDT DAARLGILKGGNHPDDVSSLIWLYLNFRHFSYLEKAIELWTVGDGYLVQLDELAQEMHGAITSGYVSSDDVHHWKARITAINEGVTPAAKAFSDALGEGS RMILRLLLITNLATALGLIVLALLRTHKLLAQRHAFADALQAEKERAQITLESIGDGVITTDVDGAIAYMNPAAEALTHWRSEQAQGLPLAALFKLLNEN AEPDGFTLIEHIVKGQFSGGSEHSKLIQRLDGSTVSVTLVGAPIRSAGKVSGAVLVLHDMTQERQYIANLSWQATHDALTGLANRREFEFRLEQVLQQVA RQQSGRHALMFLDLDQFKLVNDTCGHAAGDELLRHICALLQSDLREGDTLARLGGDEFGILLENCPAPVAEKIAESLRHTVQNLHFVWKGRPFMTTVSIG LVHISQTPTTLETSLRAADMACYMAKEKGRNRVQVYHVDDSELSLRFGEMAWVQRLHIALEEDRFCLYAQEIAPLGPTDAGSGHIEILLRLHDEAGRIIL PNSFIPAAERYGLMTSLDRWVVENVFKIIARCMHERPGRPMAMCAINLSGITIGDDDFLGFLRQKFDTYNIPPEMICFEITETSAIANLGSAIRFINELK ALGCHFSLDDFCAGMSSFAYLKHLPVDFLKIDGSFVKDMLDDPINRAMVEVINHIGHVMGKRTIAEFVETPQIEQALLEIGVDYAQGYLIERPQLFTFDS LQCRPERPQPLLFKAPGTFR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site