Pseudomonas sp. CF150, CF150_16436

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CF150 soap_scaffs_150.Contig56, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCCGGTGGTGCCGGCGGGGATCTTCACTTCCAGGCCCTGGCGATAGACTTGCTGCTCGCCAAAGAACTCGTCGCTATGGGCTTCACCCTCGGGCAGCAC GGGTTTTTCGGCCAGGCCGTCGAACTTCATGCGTTGCTGGTACAGGTAATAACCGTCGGCAATCTGCCAAAACAGCTGGGTTTCGCCGCTCTCAAGACGT TCGGAGGTAAAGGCGAAGGCTTTGCCCACCGGGAGGAAGTCGGGTTTGGTTTCGAAGGGGCTGCCCGGCGCTGCCTGGGCGAATCCCGCGAACAACACCA GCAGAAAGGTAAACAGATGCCGCATGGTCAAGCCTTAGTTCGATACAAGTGAGGCACACAATGTGTGGCGTTGATTAACCGATGATTAACCGCCGCTATT CTAGAGCGTAGGGATTATCCGGTGTTGCGAACTTTAGCGGCATAATGCGCGCTTAATCCGTGGCTTTTCTAATCGCGCCATCTTTTATGAAGGGTTAACC
DNA Sequence for Gene
>CF150_16436
ATGCACGTACTGGTCTGTGAAGACGACGAACTGATCGCCAGTGGCATCGTGGCCGGCCTGACTGCCCAGGGCTTCACCGTGGAGCGCGTGGCCACGGCCT CGGCTGCGCGGGCGATGCTCAAGGCCGCGGCCTTCGACATTATGGTGCTCGACCTTGGCCTGCCCGACGAAGACGGCCTCAAGCTGCTGCAACAACAGCG CAGCCAGGGGTTGGACATTCCGGTGCTGATCCTCACCGCGCGGGACTCGGTGACCAACCGCGTCGACGGCCTGCAAGCCGGCGCCGACGACTACCTGCTC AAGCCCTTCGACCTGCGTGAACTCGCTGCTCGCCTGCAAACCCTGCTGCGCCGTGTGGCGGGACGCAGCGTCAATCTGATCGAACATGGCCGCCTGGCCT ACGACCCCAGCAGCCGCGAGACCTTCCTCGGCGGCCAGCCGGTAGATTTGTCCCGGCGTGAACAGGCGTTGTTGCAGGCGCTTTTGCACAACAAGGGCCG CGTACTGTCCAGTGAACAGCTCAAGGACAGCGTCTACGGCTTCAGCGACGAACTGGAAAGCAACGCCCTCAACGTGCATATCCACCACCTGCGGCGCAAG TTGGGCAATGGCATCGTCGAAACCGTCAGGGGGCTGGGCTATCGCCTGGGCACCGCTGATGGGGGAGAAAACACGCCGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGAGCTTGCGCCTGCGCCTGACGTTCAAGCTGGGCGCCGCTTTTGTACTGATCTGGGTGCTGGCGGCCGCCTGGATGCTCAACGATTTGCGCAACCAGAT GATGTTTTCCCTCGACCAGCGCCTGGTGGCTTCGGCGCGCATGGTAGCCGGGCTCACCGAGCAGATGCCGGGCCTGGCCAGCGTCAGCGGTGGCGCGCAT TTGCGTACCGAACAACTGAATGTGCCGGGCGGCATGGCCTGCCAGGTCAGTTCGTTGCGCGGCGAGATCCTGGCGCGCAGCCATACCACGCCGGAGGAAG GGCTGGAGTCGCGCCGCAGCGGTTTTCGCGACCAGATCATCGACGGCGTGGGCTGGCGCAGCTTTACCCTGTCCCGTGGCGACTTGCTGATCACCACCGC CGACCGCCAGGTGGAGCGTGAAGCCCTCAACCTGTCGATCCTGCTGGCGGCGTCGGTGCCGGTCGGCGTGGCATTGCTGGGCTGCCTGTGCCTGCTGTGG
Amino Acid Sequence
>transcriptional regulator
MHVLVCEDDELIASGIVAGLTAQGFTVERVATASAARAMLKAAAFDIMVLDLGLPDEDGLKLLQQQRSQGLDIPVLILTARDSVTNRVDGLQAGADDYLL KPFDLRELAARLQTLLRRVAGRSVNLIEHGRLAYDPSSRETFLGGQPVDLSRREQALLQALLHNKGRVLSSEQLKDSVYGFSDELESNALNVHIHHLRRK LGNGIVETVRGLGYRLGTADGGENTP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site