Pseudomonas sp. CF150, CF150_15828 (dnaG)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. CF150 soap_scaffs_150.Contig53, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TAAGCGTCACGCTAAGAAAGTTCAGCGCGAACAGCGCCGCGCCGTTCGTCTGTACTAATACACAGACGTTCGTAGCAAGCTTCTGCCAAGCCCGGCCCTC AGCCGGGCTGTTGGCATTTGCGGATATCGCTTGATGCTTCACCGTCGACGCCGCACACGCGACCGAGACACTGCTTCACACGTCAGGGCTGGCTCTTTTG CCAGCGGTGCACGTCTCTTCTGACGAGCCTAACAAGGCTACTGACGAGCACACCTATTCTTCAAACAGACGATCAACCGTGTCGGCTGTGCCCATCGATG CGTTTCCGAGGCTGCCATTGGCCAAGACCGGACGCCCGGGCAACATTTCCATGCCGAAGACTGATCAGAAACTACCCTCAGTGAATATTCGGCAGATACA CTTCCTGATGACCCATGCAGACGATGATGATCGAGCCCCCTATACGTGCGCTTGAATACCTCACGGGTCCTCATTTACACGCAGTGATGACGAGAACGCC
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| DNA Sequence for Gene |
>CF150_15828
|dnaG
ATGGCCGGGCTGATTCCCCAGAGCTTTATTGACGACCTTCTGAACCGCACCGACATCGTCGATGTTGTCAGCTCACGCGTACAGCTGAAAAAAGCCGGCA AAAACTACACCGCCTGCTGCCCGTTCCATAAAGAAAAAACCCCATCCTTCAGCGTCAGCCCCGACAAGCAGTTCTATTACTGCTTCGGTTGCGGGGCGGG CGGGAATGCCCTGGGTTTCCTGATGGACCACGACAACCTGGACTTCCCCCAGGCTGTCGAGGACTTGGCTAAAGCCGCAGGAATGGAAGTGCCACGCGAA GAAAGTGGCCGCCCGCACAAACCCCGGCAACCCAACGATTCGCCGCTGTACCCGCTGCTTACCGCTGCCGCCGATTTTTACCGCCAGGCACTCAAGAGCC ATCCGCAGCGCAAGGCCGCTGTCGACTACCTCAAAGGCCGTGGCCTCACCGGCGAAATCGCTCGGGACTTCGGTCTCGGCTTCGCTCCGCCGGGCTGGGA CAATCTGTATAAACACCTTAGCAGCGACACCCTCCAGCAAAAGGCCATGATCGACGCCGGCCTGCTGGTGGAAAACGCCGAGACCGGCAAGCGCTATGAC CGCTTCCGCGACCGCGTGATGTTCCCGATCCGCGACAGCCGTGGCCGCATCATCGCCTTTGGCGGCCGCGTGCTTGGTGATGACAAACCCAAGTACCTGA ACTCCCCGGAGACCCCGGTGTTTCACAAAGGCCAGGAACTCTACGGCCTGTTCGAAGCGCGCAAGAACAACCGCAACCTCGACGAAATCATCGTGGTTGA GGGTTATATGGACGTGATCGCCCTGGCCCAACAAGGCCTGCGCAACGCGGTCGCGACCCTCGGCACCGCCACCAGCGAAGAACATCTGAAGCGCCTGTTC CGTGTCGTGCCCAGCGTGCTGTTTTGCTTCGACGGCGACCAGGCTGGCCGCAACGCCGCCTGGCGCGCGCTCGAAGCCACGCTGTCGAGCCTGCAGGATG GGCGTCGCGCACGCTTCCTGTTCCTGCCCGAAGGCGAAGACCCGGACACGCTGGTGCGCTCGGAAGGTACCGATGCGTTCCGTGCACGCATCAATCAACA TGCACAGCCGCTGGCGGATTATTTTTTCCAGCAACTGACCGAAGAAGCCGACCCGCGCTCCCTGGAGGGCAAGGCCCATATGGCCACCCTTGCGGCGCCG CTGATCGACAAAGTCCCCGGCGCCAATTTGCGCACACTGATGCGCCAGCGCCTGCTGGAGATCACCGGTTTGAGCGGTGAAGCCGTCAGCCAGCTGGTGC ACAGCGCCCCGCAAGAGGCGCCGCCAGCCTACGACCCCGGCATGGATTACGACGCCATGCCGGACTACGCTGACTTTCACCAATCTCAGGAGGCCTTCGC GCCCCAGCAGGAATGGACGCCAAAGAAGCCCGGCGCAGGTGGCAAGAAGTGGGATAAAAAGCCGTGGAGCAAAAACGGCAAGCGCGGTGATCGCGATGAA GCCTACGCGCCACGCACGCCCGTAGCGGTGGAAGCCCCCACACTGATTGCACTGCGCACACTGATTCACCACCCGCAATTGGCCGGCAAGGTTGAAAGTG CCGACCACTTTGCCAACGAGAGCAATACCTATGCTCAGGTGCTTATTGCACTGATCGAAGCCGTGCAGAAAAACCCTAAGCTAAACTCAATCCAGTTGAT GGCTCGCTGGCATGGCACGGAACAGGGCCGTTTATTGCGGGCACTGGCGGAAAAGGAGTGGCTAATTGACGGCGACAACCTTGAACAACAGTTTTTAGAC ACCATTAATAGGTTATCCGCGGGTCAACACACTCAGACCCTCGACGAACTTATCAAGAGAGCAAGGCAGCCGGGATTATCGGCTGAAGAGCAAATTCAGA TAGCAAAACAGATGCGCGACCTCTTAAAACAGAATGTTTACGCATCAAACCCGACCTCAGCTGGCGTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTCATAGCTCGGGTATAATCCTCGGCTTGTTTTTTGCCCGCCAAGACCTTCAGTGGATAGGGTGTTATGTCCGGAAAAGCGCAACAGCAGTCTCGTATC AAAGAGTTGATACTTCTTGGTCGTGAGCAGGGTTACCTGACTTACGCGGAGGTCAACGACCACCTGCCTGAGGATATTTCAGATCCTGAGCAGGTGGAAG ACATCATCCGCATGATTAACGACATGGGGATCAACGTATTCGAAACTGCGCCAGATAAGGATTCCCTTATGCTGGCCGACGCCGATACCGACGAAGCCGC CGCTGAAGAAGCTGCCGCCGCGTTGGCTGCGGTGGAGACCGATATCGGCCGCACGACAGACCCTGTGCGCATGTATATGCGCGAAATGGGTACCGTCGAG CTGCTGACACGCGAAGGCGAGATCGAAATCGCCAAGCGTATCGAAGAGGGCATCCGTGAAGTGATGGGCGCCATTGCGCACTTCCCTGGCACGGTTGACC
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| Amino Acid Sequence |
>DNA primase
MAGLIPQSFIDDLLNRTDIVDVVSSRVQLKKAGKNYTACCPFHKEKTPSFSVSPDKQFYYCFGCGAGGNALGFLMDHDNLDFPQAVEDLAKAAGMEVPRE ESGRPHKPRQPNDSPLYPLLTAAADFYRQALKSHPQRKAAVDYLKGRGLTGEIARDFGLGFAPPGWDNLYKHLSSDTLQQKAMIDAGLLVENAETGKRYD RFRDRVMFPIRDSRGRIIAFGGRVLGDDKPKYLNSPETPVFHKGQELYGLFEARKNNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHLKRLF RVVPSVLFCFDGDQAGRNAAWRALEATLSSLQDGRRARFLFLPEGEDPDTLVRSEGTDAFRARINQHAQPLADYFFQQLTEEADPRSLEGKAHMATLAAP LIDKVPGANLRTLMRQRLLEITGLSGEAVSQLVHSAPQEAPPAYDPGMDYDAMPDYADFHQSQEAFAPQQEWTPKKPGAGGKKWDKKPWSKNGKRGDRDE AYAPRTPVAVEAPTLIALRTLIHHPQLAGKVESADHFANESNTYAQVLIALIEAVQKNPKLNSIQLMARWHGTEQGRLLRALAEKEWLIDGDNLEQQFLD TINRLSAGQHTQTLDELIKRARQPGLSAEEQIQIAKQMRDLLKQNVYASNPTSAGV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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