Pseudomonas sp. CF150, CF150_15273 (glyS)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. CF150 soap_scaffs_150.Contig52, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGCAAGCCGGCGGCATCGAGTGCTACCCGGTCACCGGCGAAATCACCTACGGCCTTGAGCGCCTGGCCATGTACCTGCAAGGCGTGGACTCGGTCTACG ACCTGGTATGGGCTGACGGCCCGTTCGGCAAGGTGACTTACGGCGATGTGTTCCACCAAAACGAGGTGGAGCAGTCCACCTACAACTTCGAACACGCCAA CGTCGACAAACTGTTCGAACTGTTCGACTTCTATGAAAGCGAAGCCAAGCGCCTGATCGAACTCGACCAGCCGCTGCCGTTGCCAAGCTATGAAATGGTG TTGAAGGCCTCCCATACCTTCAACCTGCTGGACGCCCGCCGTGCCATTTCGGTTACTGCGCGCCAGCAATACATCCTGCGTGTGCGCACCCTGGCGCGTT CCGTCGCCCAAGCCTACCTGCTGGCTCGCGCCAAGCTGGGCTTCCCGATGGCAACCCCGGATTTGCGTGATGAAGTGTTGGCTAAGCTGGAGGCTGCACA
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| DNA Sequence for Gene |
>CF150_15273
|glyS
ATGAGTGCTCAAGATTTCCTGGTTGAACTGGGCACCGAAGAGCTGCCACCCAAGGCCCTCAATACCCTGGCCGATGCATTCCTGGCCGGTATCGAAAAAG GCCTGCAGACCGCTGGCCTGAAGTTTCAAGCCAAGAAGGTCTACGCCGCGCCGCGCCGCCTGGCTGTGCTGCTGACCGCGCTGGAAACCCAGCAGCCGGA TCGCAGCATCAACCTGGACGGCCCACCGCGCCAGGCGGCTTTCGACGCCGAAGGCAACCCGACCCAGGCGGCCCTTGGCTTTGCCAAGAAGTGTGGCGTG GAGCTGAGCGAGATCGACCAGAGCGGCCCGAAACTGCGTTTCAGCCAGGTCATCACCGGCAAGCCAACCGCCAGCCTGTTGCCGACCATCGTTGAAGATT CCCTGAACGACCTGCCTATCCCCAAGCGCATGCGCTGGGGTGCGCGCAAGGAAGAGTTCGTGCGCCCAACCCAATGGCTGGTGATGCTGCTCGGCGACCA GGTCATCGATTGCACCATCCTCGCCCAGAAGGCCGGTCGTGACTCCCGTGGTCACCGCTTCCATCATCCAGAAAGCGTGCGCATCACTTCGCCGGCCAAC TACCTCAACGACCTGCGCGCTGCTTACGTGCTGGCCGACGCCAATGAGCGTCGCGAGCTGATCAGCAAGCGCACCGAAGAGCTGGCCCGTCTGCAGGAAG GCACCGCCATCGTGCCGCCAAGCCTGCTCGACGAAGTGACCGCCCTGGTGGAATGGCCGGTGCCGCTGGTGTGCTCGTTCGAAGAGCGTTTCCTCGACGT GCCGCAAGAAGCCTTGATCACCACCATGCAGGACAACCAGAAGTACTTCTGCCTGCTGGACGTGGACGGTAAGTTGTTGCCGCGTTTTATCACCGTGGCC AACATCGAAAGCAAAGACCCACAGCAGATCATCGCCGGTAACGAAAAAGTCGTGCGCCCGCGCCTGACCGACGCCGAGTTCTTCTTCAAGCAAGACAAGA AGCAGAAGCTGGAAGACTTCAACCTGCGCCTGCAAAACGTGGTGTTCCAGGAAAAACTCGGCAGCGTCTACGACAAGGCCGTGCGTGTTTCCAAGCTGGC GGCCTACATTGCCCCACGTATCGGCGGCGACGCAGCCTGGGCAGCGCGTGCTGGCTTGCTGTCCAAGTGCGACCTGGCCACCGAGATGGTCGGCGAGTTC CCAGAGATGCAAGGCGTGGCTGGTTACTACTACGCCCTCAACGACGGCGAGCCGGATGATGTCGCCCTCGCCCTGAACGAGCAGTACATGCCGCGCGGTG CCGGTGCAGAACTGCCGAGCACCCTGACCGGTGCGGCCGTGGCCATTGCCGACAAGCTGGACACCCTCGTGGGTATCTTCGGTATCGGCATGCTGCCCAC CGGCAGCAAAGACCCGTATGCCCTGCGCCGTGCGGCCTTGGGCGTGCTGCGTATCCTGATCGACAAAAAGCTGGACCTCGACCTGACCCAGGCCGTGGTA TTTGCCGTCGGCCAGTTCGGCACCAAGGTCAAGCAAGCCGGCCTGGCCGAGCAAGTGCTGGAGTTTGTGTTCGATCGCCTGCGTGCGCGTTATGAAGACG AAGGCGTGGACGTTTCCGTCTACCTGTCGGTACGTGCCCTGCAACCGGGCTCGGCACTGGACTTCGACCAGCGTGTACAAGCCGTGCAAGCGTTCCGCAA GCTGCCGGAAGCCGATGCCCTGGCCGCCGTGAACAAGCGCGTGTCGAACCTGTTGAGCAAGGCCGACAGCCTCGGCACTGCCGAAGTCGACCCGGGCCTG TTTGCCGATGCCAAGGAGTTCTCGCTGAACTCAGCCATCGCCAAGGCCGAGAACGCCGTGAAGCCGCTGATCGCTGAGCGTAACTACGCTGAAGCGTTGG CGCGCCTGGCGTCTTTGCGTGAGCCGGTGGATGCGTTCTTCGAAGCGGTGATGATCAATGCCGATGATGCTGGCGTGCGCAAAAACCGCTACGCCATGCT GGCGCGCCTGCGTGGCTTGTTCATCAATATCGCCGACATCTCCGTACTGGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCATGTTGAAACTGCTGATTCTCGATCGGGACGGGGTGATCAACTACGACTCCGACGCTTACATCAAGTCGGTGGAGGAGTGGATCCCGCTGCCCGGTTC GATCGAGGCCATCGCGCAGTTGAGCAAAGCCGGCTGGACGGTGGCCATCGCCACCAACCAGTCCGGCATCGCCCGCGGTTACTACGACATCGCGACCCTG GAGGCCATGCACGCGCGTTTGCGCGCGTTAGTGGCCGAGCAGGGCGGCGAGGTGGGGTTGGTGGTCTACTGCCCCCACGGGCCGGACGAAGGCTGCGATT GCCGCAAGCCCAAGCCTGGCATGTTGAAAATTATTGCAGAACATTACAAGGTGCCCTTGGCTGGGATATGGTTCGTCGGGGACAGCCTCGGTGACCTGGA GGCGGCCAAAGCCGTCGACTCTCAGCCAGTTTTGGTTAAAACCGGAAAAGGCGAAAAGACCCAGGCTAAAAACCTGCCGGTAGGCACCTTGATTTTTGAC
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| Amino Acid Sequence |
>glycyl-tRNA synthetase subunit beta
MSAQDFLVELGTEELPPKALNTLADAFLAGIEKGLQTAGLKFQAKKVYAAPRRLAVLLTALETQQPDRSINLDGPPRQAAFDAEGNPTQAALGFAKKCGV ELSEIDQSGPKLRFSQVITGKPTASLLPTIVEDSLNDLPIPKRMRWGARKEEFVRPTQWLVMLLGDQVIDCTILAQKAGRDSRGHRFHHPESVRITSPAN YLNDLRAAYVLADANERRELISKRTEELARLQEGTAIVPPSLLDEVTALVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFCLLDVDGKLLPRFITVA NIESKDPQQIIAGNEKVVRPRLTDAEFFFKQDKKQKLEDFNLRLQNVVFQEKLGSVYDKAVRVSKLAAYIAPRIGGDAAWAARAGLLSKCDLATEMVGEF PEMQGVAGYYYALNDGEPDDVALALNEQYMPRGAGAELPSTLTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIDKKLDLDLTQAVV FAVGQFGTKVKQAGLAEQVLEFVFDRLRARYEDEGVDVSVYLSVRALQPGSALDFDQRVQAVQAFRKLPEADALAAVNKRVSNLLSKADSLGTAEVDPGL FADAKEFSLNSAIAKAENAVKPLIAERNYAEALARLASLREPVDAFFEAVMINADDAGVRKNRYAMLARLRGLFINIADISVLG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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