Pseudomonas sp. CF150, CF150_12033

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CF150 soap_scaffs_150.Contig24, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTCACGTCATCCACCCGTTGGCGGGGCAGGGCGTCAACCTGGGTTTGCTCGATGCAGCCGTGCTGGCCGAAGTGCTGTTGGCGGCGACCGAGCGCGGCGA GCGCCTGGCCGATGTGAAAGTGCTGAGCCGTTACGAGCGGCGCCGCATGCCCCACAACCTGGCGCTGATGGCGGCGATGGAAGGCTTTGAGCGCTTGTTC CAGGCCGATCAACTGCCGCTGCGCTGGTTGCGCAACGCGGGTTTGAAAATCGTCGACCAGATGCCCGAAGCCAAAGCCGTGTTTGTGCGCCAGGCACTCG GATTGACTGGCGATCTCCCCGAACTCGCCAAACCCTGAACTGACAATACAACCCTCTGTGGGAGCCGGGCTTGCCCGCGATGAGGCCGTCAGCTCCGGCG CATATTCTGGCTGTGCAACATCTGGTAACGCCTCCACCAAGCGTTACCAAATGTGAGTCCTTATCATTTGCCCTCCATTTGCAAATGAGAGACCGCACCC
DNA Sequence for Gene
>CF150_12033
ATGTTGGCACCCAAGCGCCTCCTGACTGCCCTGGCACTCACCCTGATCGGCAGCACCACCGTGCAGGCGGCCGACGAAGTCGTGGTCTACTCCTCGCGTA TCGACGAACTGATCAAGCCTGTGTTCGACGCCTACACCAAAAAGACCGGCGTACAGGTCAAGTTCATCACCGACAAGGAAGCCCCGTTGATGCAGCGCAT CAAGGCCGAGGGCGAGAACGCCACCGCCGACCTGCTGCTCACCGTTGACGCCGGCAACCTCTGGCAGGCCGAGCAGATGGGCATCCTGCAACCGTTCACC TCTCCTGTGATCGACAAGAATATTCCTCTGCAATACCGCTCATCGGCCCACGCCTGGACCGGTTTGAGCCTGCGGGCGCGAACGATCGCCTATTCCACCG ACCGGGTAAAACCGGGCGACCTGACCACCTACGAAGCCCTGGCCGACAAGCAGTGGGAAGGCCGCCTGTGCCTGCGCACGGCGAAAAAAGTTTACAACCA GTCGCTGACCGCCACGTTGATCGAGACCCATGGCGCGGCCAAGACCGAAGAAATCATCAAGGGTTGGGTGAATAACCTCTCCACCGACGTGTTCTCCGAT GACATCGCTGTGCTGGAGGCCATCAACGCCGGGCAGTGCGACGTGGGTATCGTCAACACCTATTACTACGGTCGCCTGCACAAGCAGAAGCCAGACCTGG CAGTGAAGTTGTTCTGGCCGAACCAGGGCGACCGCGGCGTGCATGTGAACCTCTCCGGCATCGGCCTGACCCAGCACGCACCACACCCGGAAGCGGCCAA GGCGCTGGTGGAGTGGATGACCACGCCTGAGGCGCAGAAGATCTTCGCCGACGTCAACCAGGAGTTCCCGGCCAACCCGGCGGTACCGCCATCGGCGGAA GTGGCGACCTGGGGCAAGTTCGTGGCCGATACCTTGCCAGTGGAAGTGGCAGGCAAGCGCCAGGCCGAAGCGATTCGCCTGATGGATCGCGCTGGCTGGA ACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGCTGCGCCGCTCGACTGTGGGAGCTGGCTTGCCCGCGATTGCATCACGTCGGTATCACTGATACACCGGGGTGCTTGTATCGCAGGCAAGCCAGCTCCC ACATTGGTTAGTGGCCGCTTCAACATCTTTATTTTTCTGAGAGCTTTTCCTTGGCCCACCCCGCCCAACGTCGCTGGTACCTGCCGGTTTTCAGCGTCGC CGCCCTGGTGCTGTTGCCGCTGAGCGTGCTGCTGCTGTCCTGGCAAAGCATCGACCCGCAGATCTGGTCGCACCTCTGGGACACTCAGATGCCCCGCTTG CTGGGCAACACCTTGACCCTGGTGCTCGGTGTCGGCCTGGGCGTGACGCTGCTGGGCGTCAGTCTGGCCTGGCTGACCAGCCTGTGCGAGTTCCCCGGGC GGCGCTGGCTCGACTGGGCATTGATGTTGCCCTTTGCAATCCCTGCCTATGTGCTGGCCTTCGTGTTTGTGGGCCTGCTGGATTTCGCCGGCCCGGTGCA
Amino Acid Sequence
>iron ABC transporter substrate-binding protein
MLAPKRLLTALALTLIGSTTVQAADEVVVYSSRIDELIKPVFDAYTKKTGVQVKFITDKEAPLMQRIKAEGENATADLLLTVDAGNLWQAEQMGILQPFT SPVIDKNIPLQYRSSAHAWTGLSLRARTIAYSTDRVKPGDLTTYEALADKQWEGRLCLRTAKKVYNQSLTATLIETHGAAKTEEIIKGWVNNLSTDVFSD DIAVLEAINAGQCDVGIVNTYYYGRLHKQKPDLAVKLFWPNQGDRGVHVNLSGIGLTQHAPHPEAAKALVEWMTTPEAQKIFADVNQEFPANPAVPPSAE VATWGKFVADTLPVEVAGKRQAEAIRLMDRAGWN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site