Pseudomonas sp. CF150, CF150_10869 (flgC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CF150 soap_scaffs_150.Contig20, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AACCCTTGATATAGGGGCTCCCGCAAGATTGGCATGCACCTTGCTATAACCCTGCTAACGAACAGCAGGTCAGCCTAAAGGTTTCCGCCATGAGCATCAG CTTCGATAAAGCGCTCGGTATCCACGAACAAGCCCTGGGCTTCCGCGCCCAGCGTGCCGAAGTCCTGGCCAACAATATTGCCAACGCCGACACCCCGAAC TACAAGGCTCGGGACCTGGACTTCTCCGCCGTGCTCGCCGCACAGCAGGACAAGACCAAGAACGGCACCTTCGCCTTGAACATGACCAACAGCCGTCATA TCGAAGCGCAAGGCCTGAGCAAGGGTGACGAGTCGCTGCTGTATCGCACGCCGATGCAGCCGTCGATCGACCAGAACACCGTCGACGCCCAGCTGGAGCA ATCGAACTACGCCGAAAACTCGGTGAACTTCCAGGCCAGCTTCACCCTGCTCAACAGCAAATTCAAAGGGCTGATGTCAGCCCTGCGTGGAGAGTAAGCC
DNA Sequence for Gene
>CF150_10869 |flgC
ATGTCTCTGTCCAGTGTTTTCAATATTGCCGGCAGTGGCATGAGCGCGCAGACCACGCGTTTGAACACCGTCGCCAGTAACATCGCCAACGCCGAGACTG TCTCGTCGAGCATTGACCAGACGTATCGCGCCCGCCATCCGGTGTTTGCCACCATGTTCCAGGGTGGTCAGGCAAACGGCAGCGATTCGTTGTTCCAGAA CCAGGACGCCGCCGGCTCAGGCGTGCAGGTGTTGGGCGTGGTCGAAGACCAGAGCAACCTGGAGGCCCGTTACGAGCCCAACCATCCGGCCGCGAACGAA AAGGGTTACGTCTACTACCCCAACGTCAACGTGGTCGAGGAAATGGCTGACATGATCTCCGCCAGTCGCTCGTTCCAGACCAACGCGGAAATGATGAACA CCGCCAAAACCATGATGCAGAAGGTTCTGACCCTGGGTCAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TAAGGGGCGCCAAATAATGGCCATCGTTGATACGTCTAACAACACGGCGGTTCAGGACCTTTTCAATTCCAAGGTCAAGACCGCGACGAATAACAGCAGC GTCAGTGACGCTTCCAAGACGGCGACGGGCAACCAGTCGCTGGGCAAGGATGCGTTCCTGCAACTGCTCGTCACTCAACTGAAAAACCAGAACCCGCTGT CGCCTCAGGACAACGGCGCGTTCGTCGCGCAGCTTGCCCAGTTCAGCAGCCTGGAAGGCATCAACACCCTGAATGACTCGGTGAACAACATCTCCAGCAA CTTCAGCTCCTCGCAGGCGCTGCAGGCTTCGTCGCTGGTGGGGCGCTCGATCATCATCCAGACCGACAAGGCCATGGTGGATACCAGCAAGAGCATGACC GGTTCGGTGGCAGTGACCTCGGCGGTGGGCAATGTCTCCGTCAAGATCACCGACAAAGACGGCAATGTGGTGCGCACCGTTGACATGGGCGCCCAGAGTG
Amino Acid Sequence
>flagellar basal body rod protein FlgC
MSLSSVFNIAGSGMSAQTTRLNTVASNIANAETVSSSIDQTYRARHPVFATMFQGGQANGSDSLFQNQDAAGSGVQVLGVVEDQSNLEARYEPNHPAANE KGYVYYPNVNVVEEMADMISASRSFQTNAEMMNTAKTMMQKVLTLGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site