Pseudomonas sp. CF150, CF150_10486
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. CF150 soap_scaffs_150.Contig19, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAAGACCTGCTGCGCTGCAGTCGCGGTGAGCTGTTCGGCCCAGGTAACGCGCAACTGCCCGCCCCGAACATGCTGATGGTGGATCGCATCACCCATATCA GCGAAGAGGGTGGCAAGTACGGCAAAGGTGAATTGGTCGCCGAGCTGGATATCACCCCTGACCTGTGGTTCTTCGCTTGCCACTTCGAAGGCGACCCTGT GATGCCAGGCTGCCTGGGCCTTGATGCCATGTGGCAGCTGGTCGGTTTCTACCTGGGCTGGCAAGGCCTGCCGGGCCGCGGTCGCGCCCTGGGTTCGGGC GAAGTGAAGTTCTTTGGCCAGGTACTGCCGAGCGCCAAGAAAGTCACCTACAACATTCAAATCAAGCGCGTCCTCAAGGGCAAGCTGAACCTGGCCATCG CCGACGGTTCGGTGACTGTCGACGGTCGCGAGATCTATACTGCCGAAGGCCTTCGGGTCGGCGTATTTACTTCCACTGACAACTTTTAAGGGTTATCCGC
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| DNA Sequence for Gene |
>CF150_10486
ATGCGCCGCGTCGTTATCACTGGTCTGGGCATCGTTTCTTGCCTGGGCAATGACAAAGAGACCGTCACCGCTAACCTGCGTGCAAGTCGCCCTGGCATCC GCTTCAACCCGGAATATGCCGAAATGGGTCTGCGTAGCCAGGTTTCCGGCTCCATTGACCTGCCCCTCGAAGAACTGATCGATCGCAAGATCTATCGCTT CGTCGGCCACGCTGCCGCCTACGCCTACCTGGCCATGAAAGACGCGATCGCGGACTCCGGCTTGAGCGAAGACCAGGTTTCGAACGTACGCACCGGCCTG ATCGCCGGCTCCGGCGGCGCATCGACCCTCAACCAGATGGAAGCGCTGGATATCCTGCGCGAAAAAGGCGTGAAGCGCGTCGGCCCTTACCGTGTCACGC GGACCATGGGCAGCACCGTTTCCGCTTGCCTGGCTACGCCATTCCAGATCAAGGGCGTGAACTACTCGATCTCCTCCGCATGCGCCACCAGCGCCCACTG CATCGGGACTGCCGTTGAGCAGATCCAACTGGGCAAGCAGGACATCGTATTTGCCGGCGGCGGTGAAGAAGAGCATTGGAGCCAGTCGTTCCTGTTCGAC GCCATGGGTGCATTGTCCACCCAGTACAACGAAACCCCAGAAAAAGCCTCCCGCGCTTACGACGCCAAGCGTGACGGTTTCGTCATCGCCGGCGGTGGTG GCATGGTGGTGGTCGAGGAGCTGGAACACGCCCTGGCCCGTGGCGCGAAGATCTACGCGGAAATCGTTGGCTATGGCGCGACGTCCGACGGCTACGACAT GGTTGCGCCAAGCGGTGAAGGCGCCATCCGCTGCATGCAGATGGCAATGTCCACCGTCGACACCCCAATCGACTACCTGAACACCCACGGCACCTCGACC CCGGTCGGCGATGCCAAGGAAATGGAAGGCGTGCGTGCGGTATTTGGCGACAAGGCTCCGAAAATCAGCTCCACCAAGAGCCTGTCGGGTCACTCCCTGG GCGCCGCTGGCGTTCACGAAGCGATCTATTGCCTGCTGATGATGGAAGGCAACTTCATGGCCGGCTCGGCCAACATCGACGAGATTGATCCGGTTGTGGC TGATATGCCGATCCTGACCAAGACCGTTGAAAACGCCAAGATCGACACCGTGATGAGCAACAGCTTTGGTTTTGGTGGCACCAATGCCACCTTGGTACTC AAGCGCTGGCAGGGCAAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCCGCAGGTTGATCACACGAAAAAGCCCCGACTGGTTCGGGGCTTTTTTTTGCGTTTGATTTGAAACCGCGTCGCCTTCATCGCAGGCAAGCCAGCTCC CACATTCGACCGTGCTCACCTTGAAGAAACGCGGTCCAGTGTGGGAGCTGGCTTGCCTGCGATTGGGCCAACCCGGTTCCCCGCCCTACACCGAAAACCG CGCCACCATCGAATTCAGATCCACCGCCAACCGCGACAACTCCTGGCTCGCTGCACTGGTCTGATTGGCCCCGGTCGATGTCTGGTGCGCCAGGTCGCGG ATATTCATCAAGTTACGATCCACCTCCCGCGCCACCGCCGCCTGCTGCTCCGAGGCACTGGCGATCACCAGGTTGCGTTCGTTGATCAAGGTGAATGCCG AGGCAATCTCTTCCAGGGCCATGCCCGCCGATTTGGCGATCTCCAGTGTGGAGCGCGCCCGAGTATTGCTCTGCTGCATCGAGCTGACAGCCTGGTCGGT
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| Amino Acid Sequence |
>3-oxoacyl-ACP synthase
MRRVVITGLGIVSCLGNDKETVTANLRASRPGIRFNPEYAEMGLRSQVSGSIDLPLEELIDRKIYRFVGHAAAYAYLAMKDAIADSGLSEDQVSNVRTGL IAGSGGASTLNQMEALDILREKGVKRVGPYRVTRTMGSTVSACLATPFQIKGVNYSISSACATSAHCIGTAVEQIQLGKQDIVFAGGGEEEHWSQSFLFD AMGALSTQYNETPEKASRAYDAKRDGFVIAGGGGMVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAPSGEGAIRCMQMAMSTVDTPIDYLNTHGTST PVGDAKEMEGVRAVFGDKAPKISSTKSLSGHSLGAAGVHEAIYCLLMMEGNFMAGSANIDEIDPVVADMPILTKTVENAKIDTVMSNSFGFGGTNATLVL KRWQGK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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