Pseudomonas sp. CF150, CF150_10174
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. CF150 soap_scaffs_150.Contig17, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTCCGGCCAACTGCCCGTGCACTCAATAACCGTGCCGACAACCGCCTCTGAACCCGCACCGCTTATATAACGTGCTGATGTTTATCAGCTTTCCAATTGA ACCTGCGGTACTTGCCGCATGCGTCAGGCTAAACAATACGCAAGTTGCCAGAACCTTCAGGTCTCAATCTGGTGCATCACAATTATTTTTATTTCTCGAC GGCGTCAAGCGGCATATCTCAAGCGCCTGATTTGCAATAAGAAATATTGATCAGATCAAGAACCTGTCAAGTGCGTCAAAACAGGGTGGGCATGCTTCAT TTTGGTGAAAATAGGATTTTTCTTATAAATATCAACAAGATGAAACACACAAAAGTTTGCGAAAAATCTGCTTGCTCATTCGAAAAACTCGGGCTAGTTT CTATTCCTGTCACCGATGACAGGAATTAACCGAACCTCGGTGCGCAGTATTACAACACTTAGAACTGGCACAAGCCGGTCAAGCCTGTGAGGAACTCGAC
|
|
| DNA Sequence for Gene |
>CF150_10174
ATGTCGCTGTTGATCCGTGGCGCCACCGTTATTACCCATGATGAAAGTTACCGCGCCGATGTGTTATGTGCAGAGGGTCTAATTCGCGCCATTGGCACGA ATCTGGATATTCCCGCAGGCACTGAAATACTCGATGGCAGCGGCCAATACTTGATGCCGGGCGGCATCGACCCCCATACCCATATGCAACTGCCCTTCAT GGGCACGGTGGCCAGTGAAGACTTTTTCAGTGGCACGGCGGCAGGCTTGGCCGGTGGTACCACGTCGATCATCGACTTCGTGATTCCCAACCCGCAGCAA TCGCTGATGGAAGCTTTCCACCAGTGGCGCGGCTGGGCCGAAAAGTCCGCCGCCGACTACGGGTTTCACGTAGCGATCACTTGGTGGAGTGAGCAGGTAC GTGAGGAAATGGCCGAGTTGGTCAGCCATCACGGCATCAACAGCTTCAAGCATTTCATGGCTTACAAGAACGCGATCATGGCGGCCGATGACACCTTGGT CGCCAGTTTCGAACGCTGCCTGGAACTCGGCGCCGTGCCCACCGTGCATGCCGAAAATGGCGAGCTGGTGTATCACCTGCAACGCAAACTGATGGCCCAG GGCATCACCGGGCCGGAAGCCCATCCGCTGTCGCGCCCGTCCCAGGTGGAAGGCGAAGCGGCCAGCCGTGCCATCCGGATTGCCGAGACCATCGGCACGC CGCTGTACCTGGTGCATGTGTCGACGAAAGAAGCCCTGGATGAAATCACCTATGCCCGAGGCAAAGGCCAGGCGGTGTACGGTGAAGTGCTCGCCGGCCA CCTGTTGCTCGATGACAGTGTGTACCAGCACCCCGACTGGCAGACCGCCGCCGGCTATGTAATGAGCCCGCCATTCCGCCCACGCGGGCATCAAGAGGCG CTGTGGCACGGCCTGCAAGCGGGCAACCTGCACACCACCGCCACCGACCACTGCTGTTTCTGCGCCGAGCAAAAAGCCGCCGGGCGTGACGACTTCAGCA AGATCCCCAACGGCACCGCCGGCATTGAAGACCGCATGGCGCTGCTGTGGCACGAAGGGGTCAATACCGGGCGTCTATCGATGCAAGAATTTGTCGCGCT GACCTCCACTAACACCGCGAAGATTTTCAACCTCTACCCCCGTAAAGGCGCGATACGCGTGGGCGCCGATGCCGACCTGGTGCTATGGGACCCCGAGGGC ACGCGGACCATTTCCGCCAAGACCCACCATCAGCAGGTGGACTTCAACATCTTCGAAGGCAAGACCGTGCGCGGCGTGCCCAGCCATACCATCAGCCAGG GCAAGCTGGTGTGGGCCGATGGTGACCTGCGCGCCGAGCGAGGGGCCGGACGATATGTGGAGCGGCCGGCGTATCCGTCGGTGTTCGAGCAGTTGAGCAA GCGGGCAGCGCTTTGCAAGCCAGTGGCCGTGAACCGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GTCCAAAAAAAGCGGACGCGGAGCGTCCAGTGAGGCATTCCCACGCAGAGCGTGGGAACGATCGCCCATCAGAGGCAGCACCTCAATAACCGTGAGGCCA ACACCGTGATCCAGACCCTGACCCACCTCCCCCACCCCCGCGAAGACGGGGCCACCCTCGCCAGCCAGTTCACCGACCTGGCACCGCCCCTCAACGCACG CCAGGCCCAACTGGAAGCCTCGCGCTGCCTGTACTGCTACGACGCGCCTTGTGTGAATGCGTGCCCCAGCGAGATCGATATCCCCTCGTTCATCCGCAAT ATCCACACCGAAAACGTGCAGGGGGCCGCGCAAAAAATCCTCTCGGCCAACATCCTCGGTGGCAGTTGCGCACGGGTGTGCCCGACGGAAATCCTTTGCC AGCAAGCCTGCGTACGCAATAACGCCGAAGAATGCGCCCCCGTGCTGATCGGCCTGCTGCAACGCTACGCCATCGACAACGCGCACTTCAGCGAACACCC
|
|
| Amino Acid Sequence |
>phenylhydantoinase
MSLLIRGATVITHDESYRADVLCAEGLIRAIGTNLDIPAGTEILDGSGQYLMPGGIDPHTHMQLPFMGTVASEDFFSGTAAGLAGGTTSIIDFVIPNPQQ SLMEAFHQWRGWAEKSAADYGFHVAITWWSEQVREEMAELVSHHGINSFKHFMAYKNAIMAADDTLVASFERCLELGAVPTVHAENGELVYHLQRKLMAQ GITGPEAHPLSRPSQVEGEAASRAIRIAETIGTPLYLVHVSTKEALDEITYARGKGQAVYGEVLAGHLLLDDSVYQHPDWQTAAGYVMSPPFRPRGHQEA LWHGLQAGNLHTTATDHCCFCAEQKAAGRDDFSKIPNGTAGIEDRMALLWHEGVNTGRLSMQEFVALTSTNTAKIFNLYPRKGAIRVGADADLVLWDPEG TRTISAKTHHQQVDFNIFEGKTVRGVPSHTISQGKLVWADGDLRAERGAGRYVERPAYPSVFEQLSKRAALCKPVAVNR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|