Pseudomonas sp. CF150, CF150_07291

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CF150 soap_scaffs_150.Contig11, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGGATTATCAGCGGGTTGTCGTTAGGCGTGCTGGTGGTGGAGGCCAGTATGTCCAGCGGCTCGCTGATCACCGCACGCCTGGCGGCGGAGCAAGGGCGTG AGGTGTACGCGATTCCGGGTTCCATCCACCACCCCGCCGCCAAGGGCTGTCATCAACTGATCCGTGATGGCGCGGTGCTGGTGGAAACCATCGAGCACAT TCTTGAAGGCCTGCGCGGTTGGCAGCGGTTGCCCCCTGCTGCGCCGGTGCCCGTGACCCATCCGCTGGTGGCGCTGCTGCACGCGGCACCGCATAGCAGC GAAGCCTTGGCGATTGCCAGCGGTCGGCCGTTGTCCCAAGTACTGGCCACCCTGACAGAGCTGGAGTTGGAGGGCCAGGTGATTTGCGAAAGCGGGCGCT GGCTGGCGCGGTGCCCGCTTTTGTAGTGGCCCGTTTTTGGCGCTAGGTTTTGTAACGAAGATCGGTAAACTGCCCAGAGCTTTAGTCCGGAGAGTAAACA
DNA Sequence for Gene
>CF150_07291
ATGGTCAACAGGTGGCGTGTGCTGGAAGCCGCACGGGAAATTCGCGCAGGCGCGGTGATCGCCTATCCGACCGAAGCGGTCTGGGGCCTGGGCTGCGACC CGTGGAACGAAGAAGCAGTGGATCGGCTGCTGGCGATCAAGAACCGCTCGGTCGACAAAGGCCTGATCCTGGTGGCGGACAATATTCGTCAGTTCGACTT TCTGTTTGAAGATTTCCCGGACACATGGATCGAACGCATGGCCAGCACCTGGCCAGGGCCGAATACCTGGCTGGTGCCCCATCAAGACTTGCTGCCCGAA TGGGTCACGGGTGTGCACGACACCGTAGCGCTGCGGGTCAGTGATCATCCGTTGGTGAGAGATTTGTGCGCCGAGGTCGGCCCGTTGATTTCCACCTCGG CCAACCCACAGGGCCGCCCGGCAGCCCGCACGCGGATTCGCGTGGAGCAGTATTTTCGCGGGCAAGTGGACCTGGTGTTGGGCGGCGCCTTGGGTGGGCG CAAGAACCCGAGCCTGATTCGGGACCTGGTGACGGGTGATGTGGTGCGCCCGTCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GACCGAGGTGCAGCTCGTTCCCACGCTCTGCGTGGGAACGCCGCATTGGACGCTCTGCGTCCGCTTGTGACGCAGAGCGTCACGGTATGCATTCCCACGC AGAGCGTGGGTACGATCTTAAGGCAGCAGGATGGTCGATCCAGTCGTGCGCCGCCCCGACAACTCCGTCTGCGCTTTGGCCGCCTCTGCCAGCGAGTAGC GCTGGTTGATATCAATGCGCACCTTGCCACTTTTGATCATCGAAAACAGATCGTCCGCCATCGCCTGCAAGTTCGCCGGGTTGTTCGCGTAGGTCGCCAA AGTAGGCCGGGTCACGTACAGCGATCCTTTCGCCGACAGAATCCCCAGGTTCACCCCATCCACTGCACCCGACGCATTGCCGAAGCTCACCAACAAGCCC CGTGGCGACACGCTGTCGAGCGAGGTCAGCCAGGTGTCTTTGCCGACGCCGTCATATACCACCGGGCACTTCTTGCCGTCAGTCAATTCCAGTACGCGTT
Amino Acid Sequence
>tRNA threonylcarbamoyladenosine biosynthesis protein RimN
MVNRWRVLEAAREIRAGAVIAYPTEAVWGLGCDPWNEEAVDRLLAIKNRSVDKGLILVADNIRQFDFLFEDFPDTWIERMASTWPGPNTWLVPHQDLLPE WVTGVHDTVALRVSDHPLVRDLCAEVGPLISTSANPQGRPAARTRIRVEQYFRGQVDLVLGGALGGRKNPSLIRDLVTGDVVRPS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site