Pseudomonas sp. CFT9, CFT9_27946

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CFT9 soap_scaffs_T9.Contig64, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCCGGGCATCAACACCGAACCCTTCTGGGGTAAGGATGGTTCGACCATCTACTTCACCTCCGACCGTGGCGGCAAGCCTCAGGTCTACAAGGCAAATGTG AACGGCGGCGGTGCGGAACGTGTGACCTTTATTGGTAACTACAACGCCAACCCCAAGCTTTCGGCCGATGAAAAGACGTTGGTGATGATTCACCGTCAGG ATGGTTTCACTAATTTCCGGGTTGCGGCCCAGGATTTGCAGCGCGGAACCGTAAAAATCCTTACAGATACCAACCTTGATGAGTCAGCCACTGTTGCGCC CAACGGCACCATGGTAATCTACGCCACCCGCCAGCAGGGCCGGGGAGTCTTGATGCTCGTGTCCATCAATGGACGCGTAAGGCTCCCACTTCCTACCGCA CAAGGCGAAGTCAGAGAACCATCCTGGTCCCCTTACCTGAACTGACGCGGCGCTACAAAAAGAAGTACTTAACACACTGGGGTTCATTAGGAGTTTCACG
DNA Sequence for Gene
>CFT9_27946
ATGGAAATGCTGAAGTTTGGTAAGTTTGCTGCTCTGGCTCTGGCTCTGTCCGTAGCCGTTGGTTGCTCCTCTAAAGGCGGCGACAATGCCGGTGAAGGCG CAGCTGTTGATCCAAACGCTGGTTACGGCGCCAACACTGGTGCGGTCGACGGCTCCCTGAGCGAAGAAGCTGCTCTGCGCGCAATCACCACTTTCTACTT CGAATACGACAGTTCGGACCTGAAGCCAGAAGCCATGCGCGCTCTGGACGTTCACGCCAAGGACCTGAAAGCTAACGGCGCTCGCGTTGTTCTGGAAGGT AACACTGACGCCCGTGGTACTCGTGAGTACAACATGGCACTGGGCGAGCGTCGTGCGAAAGCCGTTCAGCGCTACCTGGTACTGCAAGGTGTTGCTCCAG GCCAACTGGAACTGGTTTCCTACGGTAAAGAGCGTCCAGTTGCAACTGGCAACGACGAACAGTCGTGGGCTCAGAACCGTCGCGTCGAACTGCGTAAGTA A
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTCGTCATGCGAACGTGCCGTCGTGCTCTGACTGTATTGGCTCTCAGCTTCGCACCGCTTGCGGTGTGGGCTGCGGTTCCTGTAACGGATAGCAACTCAG GCTATAACAATAGCGGGAGCAGTTATCCGCCAGCAGGTTATGGCACGAACGGCGCCTATGCGGGGGGAGCGGCTACGTCCGCTCCCTCGGCACAGGGCGA GCTGTTCAACCAGCTGCAACGCATGCAGGATCAATTGGCCCAGCAACAAGGCGCCATTGAAGTGCTGCAGAACCAGGTGAACCAGCTCAAGCAAGAAGGC CTGGAGCGTTACCAGGATCTTGATCGTCGTATTGGAGCCGGTGTTGCACCTGCCGCTGATAATTCTGCTGCCGGTGGCGCGCCAAGCGCCGCTGCCGGTG GCGCAGCAGCAGGGGCCGCCGCGGCTGCCCCTGCCGCCAGCAGTGAACCGGGTGATCCGGCGAAGGAAAAACTGTATTACGATGCAGCCTTCGACCTGAT
Amino Acid Sequence
>peptidoglycan-binding protein
MEMLKFGKFAALALALSVAVGCSSKGGDNAGEGAAVDPNAGYGANTGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRALDVHAKDLKANGARVVLEG NTDARGTREYNMALGERRAKAVQRYLVLQGVAPGQLELVSYGKERPVATGNDEQSWAQNRRVELRK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site