Pseudomonas sp. CFT9, CFT9_26216

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CFT9 soap_scaffs_T9.Contig62, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CACCGAAAAAGGCATTGTCGAGCGGCCAGACACTGCCAAACTGGCCAAGTTGATGTGCCGTAAGCGCCTGCATTGAGGGTGTCGGTGGCTGTGGGGGCTC TATCGCAGGCAAGCCAGCTCCCACCTTCAACCGTGTTCACACATCAAAGGTGGGAGCTGGCTTGCCTGCGATTGGCCCTTGAAGTCAATAAAACGTCTGC ATTCCACCCTCGCAAAAAAGCACCATCGCGCCTCTGAGCCCCTCTCGTCCCCTTCAAGCCTGTCATCCGTCAAATTACTAGCCTCCATGCGCATCAGGGG GATAGGTGCGTGGCGGCGATTGTGATAACATCCGGCGGTTTCCAGGGCTGCCCCGAGGGGTGGCCTATAACGTGCAGATCCGTGTCATAACTCGTTGATT TGTCGTAAGTCGTTGTCAGGCACCGTGCCGGCAGCGGCGAGCTTCGTTCGTCCCGAATGGATGTGACGAGGTTTCACCCGAAAAAGGAATCAGGCTTCTC
DNA Sequence for Gene
>CFT9_26216
ATGGGCGAACTGGCCAAAGAAATCCTCCCGGTCAATATCGAAGACGAGCTGAAACAGTCCTACCTCGACTACGCGATGAGCGTAATTGTCGGTCGGGCAC TGCCTGATGCGCGCGATGGCTTGAAGCCCGTGCACCGGCGTGTGCTGTTCGCGATGAGCGAGCTGGGTAACGACTGGAACAAGCCGTACAAGAAATCTGC CCGTGTTGTCGGTGACGTGATCGGTAAGTATCACCCTCACGGCGACACTGCGGTGTACGACACCATCGTTCGGATGGCGCAGCCGTTTTCCCTGCGCTAC CTGCTGGTAGACGGCCAGGGTAACTTCGGTTCGGTGGACGGCGACAACGCCGCGGCCATGCGATACACCGAAGTGCGCATGACCAAGCTGGCGCACGAGC TACTGGCCGACCTGCATAAAGAAACCGTGGACTGGGTGCCGAACTACGACGGCACCGAAATGATCCCGGCTGTCATGCCCACCAGGATTCCCAACCTGCT GGTCAACGGTTCCAGCGGTATCGCCGTGGGCATGGCCACCAACATCCCGCCGCACAACCTCGGTGAAGTCATCGACGGTTGCCTGGCCCTTATCGACAAC CCTGAGCTGACCGTCGATGAGCTGATGCAATACATTCCCGGCCCGGACTTCCCGACCGCCGCGATCATCAACGGTCGCGCCGGCATCATCGAAGCCTACC GCACCGGCCGTGGGCGCATTTACATGCGCGCCCGCTCGATCATCGAAGACATCGACAAGGTCGGTGGCCGCCAGCAGATCGTCATCACCGAACTCCCTTA CCAGTTGAACAAGGCACGCCTGATCGAGAAGATCGCCGAGCTGGTTAAAGAGAAGAAGCTGGAAGGCATCACCGAGCTGCGCGACGAGTCCGACAAAGAC GGCATGCGCGTGGTCATCGAGCTGCGCCGCGGCGAAGTGCCGGAGGTGATCCTCAACAACCTCTACGCCCAGACCCAGCTGCAAAGCGTGTTTGGTATCA ACGTGGTTGCCCTGATCGACGGCCGCCCGCGCATCCTGAACCTCAAGGACCTGCTGGAAGCCTTCGTGCGTCACCGTCGCGAAGTGGTCACCCGCCGTAC CGTGTTCGAACTGCGCAAGGCCCGCGAGCGCGGCCATATCCTGGAAGGCCAGGCGGTTGCGTTGTCGAACATCGACCCGGTGATCGCCCTCATCAAGGCC TCGCCAACCCCGTCGGAAGCCAAGGAAGCGCTGATCAGCACACCTTGGGAATCCAGTGCCGTGGTCGCGATGGTTGAGCGCGCTGGCGCCGACTCGTGCC GCCCCGAGACCCTGGACCCGCAATACGGTCTGCGTGAAGGCAAGTACTTCCTGTCGCCAGAACAGGCCCAGGCCATCCTGGAACTGCGCCTGCACCGCCT CACCGGCCTTGAACACGAGAAGCTGCTGGCCGAGTACCAGGAGATCCTCAACCAGATCGGCGAGTTGATCCGCATCCTCAGCAGCGCTGTGCGCCTGATG GAAGTGATCCGCGAAGAACTGGAAGTGATCCGCGCCGAATACGGCGACGTGCGCCGCACCGAAATCCTCGATGCGCGCCTGGACCTGACCCTGGGTGACA TGATCCCGGAAGAAGAGCGCGTGGTGACCATCTCCCACGGTGGCTATGCCAAGACCCAACCGTTGGCGGCCTACCAGGCCCAGCGTCGTGGCGGTAAAGG TAAATCGGCTACCGGCGTGAAGGATGAGGACTACATCGCTCACCTGCTGGTCGCCAACAGCCACACCACGCTGCTGCTGTTCTCCAGCAAAGGCAAGGTG TACTGGCTCAAGACCTACGAAATCCCGGAGGCCTCCCGCGCTGCCCGTGGTCGTCCGTTGGTCAACCTGCTGCCGCTGGACAGTGACGAATACATCACCA CCATGCTGCCGGTCGAGGAATACACCGAAGGTCACTTCATCTTCATGGCCACCGCCAAAGGCACCGTGAAGAAGACCCCGCTGGAATCCTTCAGCCGTCA ACGCAGCGTGGGCCTGATCGCCTTGGAACTGGACGAAGGCGACGTGCTGATTTCCGCAGCCATCACCGATGGCGAGCGCGAAGTCATGCTGTTCTCCGAT GGCGGCAAGGTCACACGCTTCAAGGAATCCGACGTACGAGCCATGGGCCGTACCGCCCGCGGTGTACGCGGCATGCGCCTGCCGGAAGGGCAGAAGCTGA TTTCGATGCTGATCCCGGAAGAAGGCAGCCAGATCCTCACCGCTTCCGAGCGTGGTTATGGCAAGCGCACCGCCATCAGTGAGTTCCCGGAGTACAAGCG TGGCGGCCAGGGCGTGATCGCCATGGTCAGCAACGACCGCAACGGCCGTCTCGTCGGCGCGGTGCAGGTGCTCGACGGCGAGGAGATCATGCTGATTTCC GACCAGGGCACCCTGGTGCGTACCCGTGTGGCGGAAGTGTCGAGCCTGGGCCGTAACACCCAGGGCGTGACCCTGATCAAGCTGGCCAAGGACGAAAAAC TGGTCGGCCTGGAGCGTGTGCAGGAGCCTTCGGAAGTCGAAGGCGAAGAGCTCGAAGGTGAGGAATTCGAAGGCGAGGTGATCGCAGCTGGCGATGACAA CGTTGACGAGCCAACCCTCGACGCTGCCGCAGACGAAGAAGAACCGCAGGAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGGACACACAGGGGGCGGATGAAGATTCGCCCCCTTGTTGTTTGTCCCCTATGAAACACAGCGCCCTTTGCCTGGACGCGGTCCATGTGGGAGCTGGCT TGCCTGCGATGCAGGCGCCTCGGTCATTCAGTGATACCGCGGCGCTGCTATCGCAGGAAAGCCAGCTCCCACAGATGTCCGCTCCAGAATGAGGGCGTTG CTGACATGATTGCAGCCCCACCAGATCAGAGTGAGATTGGATGTGAGCAAGAGAGCCTATAACTTCTGTGCCGGTCCCGCGGCGCTTCCTGAAGCAGTCC TGCAGCGTGCGCAGGGTGAACTCCTCGACTGGCATGGAAAAGGCCTCTCCGTGATGGAAATGAGCCATCGCAGCGATGAGTTCGTGTCCATCGCCAACAA GGCCGAGCAGGACCTGCGCGACTTGCTGGACATCCCATCCCATTACAAAGTGCTGTTCCTGCAAGGTGGTGCGAGCCAGCAGTTCGCCCAGTTACCGCTG
Amino Acid Sequence
>DNA gyrase subunit A
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWNKPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRY LLVDGQGNFGSVDGDNAAAMRYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMATNIPPHNLGEVIDGCLALIDN PELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRIYMRARSIIEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINVVALIDGRPRILNLKDLLEAFVRHRREVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKA SPTPSEAKEALISTPWESSAVVAMVERAGADSCRPETLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQEILNQIGELIRILSSAVRLM EVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEERVVTISHGGYAKTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV YWLKTYEIPEASRAARGRPLVNLLPLDSDEYITTMLPVEEYTEGHFIFMATAKGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSD GGKVTRFKESDVRAMGRTARGVRGMRLPEGQKLISMLIPEEGSQILTASERGYGKRTAISEFPEYKRGGQGVIAMVSNDRNGRLVGAVQVLDGEEIMLIS DQGTLVRTRVAEVSSLGRNTQGVTLIKLAKDEKLVGLERVQEPSEVEGEELEGEEFEGEVIAAGDDNVDEPTLDAAADEEEPQE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site