Pseudomonas sp. CFT9, CFT9_16822 (fis)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CFT9 soap_scaffs_T9.Contig48.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTGCATGGCCGCACCCGCGCCGACCTTTACACCGGTGAAGCCGAGTACGACACCATTGCCGCGATCAAGCAGGCCGTGTCGATGCCCGTCTTTGCCAATG GCGACATCGACAGTGCCGAGAAAGCCCGGCGCGTGCTGCACGCGACCGGTGCCGATGGTTTGTTGATTGGCCGGGCCGCCCAGGGGCGGCCGTGGATTTT TCGTGAAATCGAGCATTTCCTGCGTACTGGTGAAGTCTTGCCGGCACCAGAGTTGGTCGAGGTGGAACGTATTCTGCTAGAGCATCTGGCCGCCCTGCAC GCCTTCTATGGGGACGTGATGGGAGTACGCATTGCTCGCAAGCATGTCGGCTGGTATCTCGCCACCTTGCCGGGCGCCAAGGAATTCCGCGCTCAGTTCA ATCGTTTGGATGAAACGCAGGCACAGGTCGCCACCGTTCGTGAGTTCTTCGCCGGACGCGACAAGAGCCTGGGAACAGGGGATGGAGAAGGGGTGGCCGC
DNA Sequence for Gene
>CFT9_16822 |fis
ATGACGATGATGACCGAGACTTTAGTGAGTGGAACAACACCCGTGAGCGACAACGTCAATTTGAAACAGCACCTCAACACGCCGAGCGAAGAAGGCCAGA CCCTTCGCGGGAGTGTCGAGAAGGCGCTGCACAATTATTTCGCCCACCTTGAGGGCGCTTCCGTCACGGATGTGTACAACCTGGTGCTCTCCGAAGTCGA GGCGCCCTTGCTCGAAAGCGTGATGAACTACGTCAAGGGCAACCAGACCAAAGCCAGTGAGCTGCTGGGCCTCAACCGTGGCACCTTGCGCAAAAAGCTC AAGCAGTACGATTTGCTGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCATTCAATCAAACCAGAAAGGCGCCCGCGTAAAACCGGTCGCCTTTTTTGCTGACTTCCTTTGCTTTTGATGGAAATTGAGATGACCGACCAGACCACC CGCCTGCCGATCCGCCGTGCCTTGATCAGTGTATCCGACAAGACCGGGATCCTTGAATTTGCCCGGGAGCTGGAAGCCCTGGGTGTGGAAATCCTCTCCA CGGGCGGGACCTTCAAACTGCTGCAGGACAACGGCGTGGCCGCAGTGGAAGTCGCGGACTACACCGGTTTCGCAGAAATGATGGACGGTCGCGTCAAGAC CCTGCACCCGAAAATCCACGGCGGCATCCTTGGCCGTCGCGGCATCGACGACGCCATCATGACCGAGCACGGCATCAAGCCGATCGACCTGGTGGCCGTT AACCTCTACCCGTTCGAAGCCACCATCAACAAGCCAGGCTGCGACCTGCCGACCGCCATCGAAAACATCGATATCGGCGGCCCGACCATGGTGCGCTCGG
Amino Acid Sequence
>Fis family transcriptional regulator
MTMMTETLVSGTTPVSDNVNLKQHLNTPSEEGQTLRGSVEKALHNYFAHLEGASVTDVYNLVLSEVEAPLLESVMNYVKGNQTKASELLGLNRGTLRKKL KQYDLL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site