Pseudomonas sp. CFT9, CFT9_16787

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CFT9 soap_scaffs_T9.Contig48.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGCTTTGCCATGCTCGATATCGACCACTTCAAGCGCGTCAATGACAGCCACGGCCACCCCATGGGCGACCGGGTGATCAAGAGCCTGGCACTGTTTCTCA AGCAGCGTTTGCGCAAGACCGATTACATCGGCCGCTACGGCGGTGAAGAGTTCGCCATCGTGATGCCCGACACCGACCTGGAATCGGCCTGCAAGGTGCT AGACGACATTCGCCGGCGCTTTGCAGAAATCCACTACCCCGCCCAACCGCAGGATTTGTGGTGCACCTTCAGCGCCGGCCTGGTGGAGCTGTGCGACGAT TCCGACAGCCTGATGATGGCCGCTCAGGCTGACGAAGCGCTCTACCGCGCCAAGGACGCCGGACGCAACCGCGTGCAAGCCGCTCGCACATCAAAGCAAA GTGCCATCTTTTCACCAGAATCCACCGATTCGGTCATAACGCTGTAATACAAACGCAATAAATTCAGGCGCTTATCTCTTGCCGTCGGTTGAAACCCCGC
DNA Sequence for Gene
>CFT9_16787
ATGCGCCTGAAGCTGCTGACCAATCTCAATACCCTTCTGCTGGTGGCCGTGTGCCTGGCCCTCGGCGCGACGCTGTGGTGGTCGCAACGGGCGCTGGAGC GCCCGTACTTGTTGATGGAGCGCTACCTGGGGTTGTCCCAGGTCTTTCAAAACCAGGCCGCCCGAAACATCGAGGACTACTTGGCCAGCGGCGATGCCCT GCGCCTGAGCAGTGCCACCCAGAGCCTGGAAAGCCTGCAGCTGCAACTGGGCGAACTGCCGCCCGAATTGGCGCAAAGCCTGCGGCCCAGCCTCGTGGAG TTGGAGACCTTCAGCAAGACTGACCTGTTGGCCGCCGGTAAATTGGCTGGCGACCCGCAAGCGCTGTTGCTGCAAGCCGAACGTGAACTGGGCGCAAACC TGGAACAACTGAGCCAGTACGCCAGCGGCGTCAATTCCGCGGAGGCTGCGCGCTATATGTCGCCGCTGCTCGCCGCCTCGCAACATTTGGGCAAACTGTC CCTGGCCCGCGACAAGCTGGTCAGCAGCGGGCGCGCCGAGTTGGCTGCTGATGTCGAGCGGGAGGTGACTAACCTGCGAACCCAGGCCGACCTGCTCGCG CAACTGCCCCTATTGGGAATAAAGGCCAGCGCTGAATCCAACACCGATGATTTTTCCGCGCTGATGGGGCTGGAAAACACCGAAAAAACCGAAGCTCAGG ACACCGGCGTCGACCTCAAGCGCGAACTCAACAGCCTGCTGACCCGCTACCCCGCCGAGCTGCAGCGCACCCGTGAACAGATCCAGCAACGCGCCGATCT CGCCGCCAGCACCCACCTTAAAATCACTAACGTGCAACAAGCCATCGCCGGCCTGGAACCCGTGGTGCGCGCGCAACATGCCAGGATCCAGGGCGAAGTA CGCGTGATGCAGGGCGTGATGATTGGCCTGATCCTGCTGATCGCATTGCTGATCGACACCCTGCAACGCCGCCTGGCGCGCGTACTGACCAACCTGGCAC CCGCCTTGTCGACCTGGGCCGAAGGCGACTTCAGCCAACCGATTGCCCTGGGCAAGACCAACCGTGAACTGCACGATATCGAGGCCTCCCTCAACCGCCT GCGCGCCTACCTGGTGGATTTGGTAAGCACCATCCGCGGCAATGCCGAAGAAGTGGCGGGCAGCAGCCGCGCCCTGGCCGAACTGAGCAGCGGCCTGCAC GACGGCGCCGAACGCCAGGCCGGCGACACCGCGCAAATCCGTGATTCCCTGGGTGAGTTGGAAGCCACCATCCAGCAAGTTGCCGGGGATGCCAGCCAGG CGGCCGGCGCCAGCCGCAGTGCGGGCCAGGCCGTGGAGCAAGGCCAGCGTGTGATCGGCCTGAGCCTCACCGGGCTGCATGCGCTGGTGGGCGAAGTGCA GCAAAACGCGCAGATGATCGAGAAACTTGCCGAAGAGTCCGCCACCATCGGCGGCGTGCTCACGGTGATTCGCTCGATTGCCGACCAGACTAACCTGCTT GCGCTCAACGCCGCCATCGAAGCCGCCCGCGCCGGTGAGGCCGGACGTGGTTTCGCCGTGGTAGCCGACGAAGTGCGTTCCCTGGCCCAGCGTACCGCCG GTGCCACTGCCGAAATCCAGGGCCTGATCGCCGGCCTGCAAACTGCCGCGCACCAGTCGGTAGAAGGCATGCGCGCCCAGGTCGAACACGCCGAAGCCAC CGCCCAGCAGGCCCAGGCGGCGGATGGCGCGCTGGATGAAATCGTCGGCGCGATCCAGACCATCTCGGATACCGCCGTACGCATTGCCGATGTGACCGCG CAGCAAAGTGGAGCCGTGAGCGAGATTCGCGACAACAGTGAACGGATACATCAATTGGGTGAGGATAATTTACTGCGCATTGGCCAGGGCCGTAGCCAGG GCGAACACCTGCTGGTACTGGGCGGGCAACTGACTACCGCCGTGCAAGCCTTCCGCGTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCGATCTAATGTGGGAGCTGGCTGATCGTTCCCACGCTCCGCGTGGGAATGTCGCCCCAGACGCTCCGCATCCCGCTTTAAAGCCGTGACGCAGAGCAT CACTGGATGCGTGCCCACGCGGAGCGTGGGCACGATCAGCTCCCACACTGACCAGATGCAGGGTCTTGGTCACAAATTTTGCGCAATCCTCGCTAATCGT GCCGGCTACTGCATAGAACTGGACAGTCACAAAGGCTTTGCGGCATAGTCGCCGGGTTCTGACGCACCCACACCAATAACAAGGAACAGCCAATGGCGAC CTTACTGGTTCTTCACGGACCCAACCTGAACCTGCTTGGCACCCGCGAACCGGGCGTCTACGGGGCAGTAACCCTCGATCAGATCAACCTCGACCTGGAA CGACGGGCACGTGAAGCCGGCCACCATTTGCTCTACCTGCAAAGCAATGCCGAGTATGAATTGATTGATCGTATCCATGCCGCGCGCGGCGAAGGCGTGG
Amino Acid Sequence
>putative methyl-accepting chemotaxis protein
MRLKLLTNLNTLLLVAVCLALGATLWWSQRALERPYLLMERYLGLSQVFQNQAARNIEDYLASGDALRLSSATQSLESLQLQLGELPPELAQSLRPSLVE LETFSKTDLLAAGKLAGDPQALLLQAERELGANLEQLSQYASGVNSAEAARYMSPLLAASQHLGKLSLARDKLVSSGRAELAADVEREVTNLRTQADLLA QLPLLGIKASAESNTDDFSALMGLENTEKTEAQDTGVDLKRELNSLLTRYPAELQRTREQIQQRADLAASTHLKITNVQQAIAGLEPVVRAQHARIQGEV RVMQGVMIGLILLIALLIDTLQRRLARVLTNLAPALSTWAEGDFSQPIALGKTNRELHDIEASLNRLRAYLVDLVSTIRGNAEEVAGSSRALAELSSGLH DGAERQAGDTAQIRDSLGELEATIQQVAGDASQAAGASRSAGQAVEQGQRVIGLSLTGLHALVGEVQQNAQMIEKLAEESATIGGVLTVIRSIADQTNLL ALNAAIEAARAGEAGRGFAVVADEVRSLAQRTAGATAEIQGLIAGLQTAAHQSVEGMRAQVEHAEATAQQAQAADGALDEIVGAIQTISDTAVRIADVTA QQSGAVSEIRDNSERIHQLGEDNLLRIGQGRSQGEHLLVLGGQLTTAVQAFRV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site