Pseudomonas sp. CFT9, CFT9_16347

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CFT9 soap_scaffs_T9.Contig48.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGCTGTGATCCATCTTGCCCATGCCGGTGGCGGTGAGCATGCCACTGGCTTGCATCTGCAACATCTCTTTCTGGTGGGCAGCATGCATGGCCGCGTCAC CCAGGTTGAACTCATGCAGCAACTGGCCTTTGTTGACCAGCACGAAGCGCACGGTTTCACCGGCCTTGACGTCCAGGGACTTGGGCTCAAAGGCAATGTC CCGCAGCGTGACTTCAACGGTGCGCGTGGCTTTATCCGCCGGGGCCGGCTGGCCGAACGCGTAGGTGTGAGTCGCATCCGCCAGTGCATTGAAACTCAAC GCCAACAGGCAGCCCGCCAATAACTGGGGTGTACGCAACGCCATCTTTCACTCTCCAAAATAGGTATCCAGCTTGGGCAACACTTTAAGATGGCCTCGCT GCCAGCCAGCTGACTGCTAGATTACAACTTTGTCAGCTTGCGCCCATACCCCGGAGCCCAGGGTATAAAGGCCGGCGTCCACCTTGACCAAGAGCCCTAC
DNA Sequence for Gene
>CFT9_16347
ATGAAACTGCTGATCGTCGAAGACCAACCCAAAACCGGTCATTACCTGCGTCAGGGCCTGGCCGAAGCGGGCTTTACCACCGAACTGGTGGCCGACGGCA CCAGTGGCCAGCACTTGGCGCTAACGGGCGACTATGACTTGTTGATCCTCGATGTGATGCTGCCCGGCCGCGATGGCTGGCAAATCCTGCAGGCGGTGCG CAGTGCCGGCCTGGACATCCCGGTGCTGTTCCTCACCGCTCGCGATGCCGTAGAAGACCGAGTACATGGCCTGGAGCTGGGCGCCGACGATTACCTGGTC AAACCCTTCGCATTTTCCGAACTGCTGGCGCGGGTGCGCACCTTGTTGCGCCGTGGCAGCAGCATGCCGCAGGAGACCACGCTGCAACTGGCCGACCTGA GCCTGGACTTGATCCGCCGCCGCGTCGAGCGCAGCGGCCAGCGCATCGACCTCACCGCCAAGGAGTTCGCCTTGCTGGAGCTGCTGCTACGCCGCCAGGG CGAAGTGCTGCCCAAGACGCTGATCGCCTCCCAGGTGTGGGACATGAATTTCGACAGCGACACCAACATCATCGAAGTCGCCATTCGCCGCCTGCGCCTG AAAGTCGACGACAATTTCCCCAATAAGCTGATCCACACCGTGCGCGGCATGGGTTACGTGTTGGAGGAACGGTTCACGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCAAGCGCCTGTCCCTGACCAGCCGCCTCGCGCTGCTGTTTGCCGCCTGCACGGCGGTGGTCTCGTTGATCGCCGGGGTGTTGTTCAACCGGGCCAGCGA GGCGCATTTCATGGAGCTGGACCAGCAACAGCTCGAAAGCAAACTGGTGGCCCTGCGCAGCACCTTGCAGGGTGTCGCCTCACCGGAAGACCTCGCCCGG CGAACCCCTCAACTGCGCGCCGAACTCGATCACCAGCCCGACCTCGCCTTGCGCATCACCGGAGCTGGGCAACGTTGGCTGGACGGCGCGCCACACCTTC CCTTGCCCCAAGCACCCGGCCTGCACAGCCTGCAATACGCAGGCACCGACTACCGCGTATTCATCGCGCCCTTGACGCCCAGCCAACTGGATTCGCCACA ACTGACCCTGATCCTCGACATCACCCACCACCAGCACTTTCTGCAACGCATGCAACGCTTGATCTGGCTGACCGTCGGCCTCTCGGCCCTGGCCACTGCC
Amino Acid Sequence
>heavy metal two component system, response regulator
MKLLIVEDQPKTGHYLRQGLAEAGFTTELVADGTSGQHLALTGDYDLLILDVMLPGRDGWQILQAVRSAGLDIPVLFLTARDAVEDRVHGLELGADDYLV KPFAFSELLARVRTLLRRGSSMPQETTLQLADLSLDLIRRRVERSGQRIDLTAKEFALLELLLRRQGEVLPKTLIASQVWDMNFDSDTNIIEVAIRRLRL KVDDNFPNKLIHTVRGMGYVLEERFT
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site