Pseudomonas sp. CFT9, CFT9_14828
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. CFT9 soap_scaffs_T9.Contig45, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGTGAAGCCGAAAAGCTCTATGAACTGTGCTCGCGCTACAAGACTCAATTGATCATCAACGACGATGCCGAACTGGCCGCGCGACTGGGCGTCGGCGTAC ATCTGGGCCAGACCGACGGCCCGCTGACCTCGGCCCGGGCACTGCTCGGCGCCAAGGCGATCATCGGCGCCACCTGCCACAGCCAGATCGAACTGGCCGA ACAGGCCGCCAAAGAAGGCGCCAGCTACGTCGCCTTCGGCCGCTTCTTCAATTCCACGACCAAACCCGGCGCACCCGCCGCCACCGTTGACATGCTGGCC CAGGCCCGCAAGCGCCTGCACCTGCCGATCTGCGTAATCGGCGGCGTCACCCTGGAAAACGCCGAGCCGCTGGTGGCCCACGGGGCTGACCTGCTCGCCG TGGTCCATGGCCTGTTCGGTGCCGACAGCACCCAGGAAGTCACCCGCCGCGCCCGTGCATTCAACGACCTTCTTAAATCTTCAGTTTAGAGAGCCCGATC
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| DNA Sequence for Gene |
>CFT9_14828
ATGTCCCGTTCCGAAACCCTGTTTGCCAACGCCCAGAAACACATCCCCGGCGGTGTGAACTCCCCCGTGCGTGCGTTCAAGAGCGTGGGCGGCACGCCGT TGTTCTTCAAGCATGCCGAAGGCGCCTACGTCACCGATGAAGACGACAAGCGCTATGTCGACTACGTCGGCTCCTGGGGCCCGATGATCCTCGGCCACAG CCATCCGGATGTGCTGGAGGCGGTGCGCCAGCAACTGCAACACGGCTTGTCCTACGGCGCCCCGACCGCGATGGAAACCGAGATGGCCGACCTGGTCTGC TCGATCGTGCCGTCGATGGAAATGGTGCGCATGGTCAGCTCCGGCACCGAAGCCACCATGAGCGCGATCCGCCTGGCCCGTGGTTTCACCGGCCGCGACA ACATCATCAAGTTCGAAGGCTGCTACCACGGCCACTCCGACAGCCTGCTGGTGAAAGCCGGCTCCGGCGCGCTGACCCAGGGCGTCCCCAATTCCGCTGG CGTACCTGCGGCATTCGCCAAGCACACCCTGACCTTGCCGTTCAACGACATCGCAGCCGTCGAGCAGATGCTCAGCGAAGTCGGCCAGGACGTTGCCTGC ATCATCGTCGAGCCGGTTGCCGGCAACATGAACTGCGTTCCACCGGCCCCGGGTTTTCTTGAGGGCTTGCGCGAGCAGTGCGACAAGCATGGCGTGGTGC TGATTTTTGACGAAGTGATGACCGGTTTCCGGGTCGCCCTCGGTGGCGCCCAGGCTTACTACGGCGTTACGCCAGACCTGAGCACCTTCGGCAAGATCAT CGGCGGCGGCATGCCGGTAGGCTGCTTCGGCGGCAAGCGCGAGATCATGCAACACATCGCCCCGCTCGGCCCGGTATACCAGGCAGGCACCTTGTCGGGT AACCCACTGGCCATGGCCGCCGGCCTGACCACCCTGCGCCTGATCAGCCGCCCGGGCTTCCACGCCGAGCTGACCGACTACACCACGCGCCTGCTCGACG GCCTGCAACAACGCGCCGACGCCGCCGGCATCCCGTTTGTGACCACCCAGGCCGGTGGCATGTTCGGCCTGTACTTCAGCGGCGCCGACGATATCGTCAC CTTCGATGACGTGATGGGGAGCGATGCCGAGCTGTTCAAGCGCTTCTTCCACCTGATGCTCGAAGGCGGCGTGTACCTGGCACCGAGCGCCTTTGAAGCC GGCTTCACCTCGATTGCCCATGGCGAAGCCGAACTGAAATTGACCCTGGATGCTGCCGAGCGCGCCTTCGCGGCCCTGAAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTGACGGCAACCTCTGACGTTGCCCCTGGCAGCGTCAGATTTGCTACTTTGCTTACAGAGAATTCCTGGTTTTTTCGAGAATTGCACTGCAATCCGGCAG ATAACTTGCCCAAGCAGCAGAAAAACGAGTAAAGACTTTGTAAGCAGAGGCCTGCTTATTTCATAATGCGCGCTTATTGGACTCCCTCGAGGGTCCGCGC GCCCCGTCAGAGGTAAGTCGATTCCCATGAAACGCACCGGCCGCACCCTGGTTCTGGGCTGCCTGTTGCTCCTTCAACCGCTACTGGCACATGCCCAGGC CGGCGGCAACTCGTTGTTAATTCCAGCGATGGGTCGTTGCACCCTCAATACCCAGCCAGAGAGCCAGGCCGAAGCCCTGAGCGCGTGCCAGAAACAGGCC GAGGACGGGGATGCGCAGGCGCAATACGAGTTGGGCGAGTACTACCACGACAGCAAGAACCCGGCCGTTGACCTCAACAAAGCGTTGAGCTACTTCGAGA
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| Amino Acid Sequence |
>glutamate-1-semialdehyde aminotransferase
MSRSETLFANAQKHIPGGVNSPVRAFKSVGGTPLFFKHAEGAYVTDEDDKRYVDYVGSWGPMILGHSHPDVLEAVRQQLQHGLSYGAPTAMETEMADLVC SIVPSMEMVRMVSSGTEATMSAIRLARGFTGRDNIIKFEGCYHGHSDSLLVKAGSGALTQGVPNSAGVPAAFAKHTLTLPFNDIAAVEQMLSEVGQDVAC IIVEPVAGNMNCVPPAPGFLEGLREQCDKHGVVLIFDEVMTGFRVALGGAQAYYGVTPDLSTFGKIIGGGMPVGCFGGKREIMQHIAPLGPVYQAGTLSG NPLAMAAGLTTLRLISRPGFHAELTDYTTRLLDGLQQRADAAGIPFVTTQAGGMFGLYFSGADDIVTFDDVMGSDAELFKRFFHLMLEGGVYLAPSAFEA GFTSIAHGEAELKLTLDAAERAFAALK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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