Pseudomonas sp. CFT9, CFT9_14513

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CFT9 soap_scaffs_T9.Contig45, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCGATGTTCAGGTCCGGCATCGGACGCGCTTCGCCTTCGAACTCGGTGTCGACGCCCGCCATGATTTTCAGCAGGGTGGACTTACCCGAACCGTTGAGGC CGAGCACGCCGATCTTGGCGCCTGGGAAGAAGGACAGCGAAATGTTTTTCAGGATTTCCCGCTTCGGCGGAACAACTTTTCCCAGCCGATGCATGGTGAA GACGTATTGAGCCATGGTGAACCTAGCGTCAGTGACTGATGAATTAAGCGGACGAAGCCCGTGCCAGGCCATGCGCCGCGCGGGCCTTTGACTATCATCA ATGCCAGCGAGCAAAAAAAGCCTGAATGTCTGGGGCTGGAACGCCCCCGCGTAACCGGCAAAGCTACCTGAATGCGCTGGGGCAGTCCAGCCAGGCAGGA CTGGCACTTTGCCACAACTCAAGGCATGCTAGCCGCCCTTCGGGCGTCCGGCTTATAGTGCACGTCGCGCGCCAGTCCAGCCAAACCGCAGGATCACAGT
DNA Sequence for Gene
>CFT9_14513
TTGTCCAACGTCACGCCGCCCACGCCCTTGCGCGCCGCTCATATTGCGCCGGGAGCGCCCCTGCACGGCACCTTGAAAGGCGCGTTGGCGACGCTTGTCC TGCTGTTGCTCGCCCTGTTGTTCTGGCAACTGCTGGACCAATTGCAGCAAAACCAGAAAAACCAACAGCAATACACCATCGACTACAGCGCCGACCTGGC CGAGCAGATCAGCCAGAACATGGCCCTGAGCGCACAGATCGCCCTGAACCTGTTGCCGATTGTCGAGCCGCCGCGCAATGCCGAACAGCAGCAGGCCCTG ATGCGCACGCTGCAGCGCTCATTACCGGACCTGCGCAGCTTCGCCCTGCTCGCCCCCAGCGGCGCACTGATCAGCGACACTGCCGAAGGCAGCCAAGACA GTGCCCTGCTTGAAGACCTGGTCAAACGCAGTCACGCCCAGTCCTACTACCTGAGCAATGATAATGACGGCACGGTCATCTATCTGTTGCTGCACCAACC CAGCGGTGGCTCCAAGGTGTACTGGGCCTTGCGCCTGGCGCCCAATTATCTGGCCAACCTCACACGCCAGGATGTCCAGGGCCAGCGCCCGATGTGGGCA ATCGAGAACAGCCTGAACCATCGTGTGGTCAGCCGTGACAGCGGCATGCCGGCGCAGTGGTCCGGCGCCCTGACACCGGAAGAATTGAACCGCAGCGTGC TGGTCACGCCGTTGAGCAAAAGCGATTGGCAACTGCGCGGCATGTTTGACCGCAGCGCGGTATTGGAACAACTACTGCCCGCCTTTATCGGCAAGTGCCT GCTGGGCCTGGCGTTCTCGCTGATCCCGGTGATCGTGCTGCTCAACATGCGCCGCCGCCAACGCCAGGTGAACGAAGGCCGGCGACGCTACCAGGACATC TTCGAAGGCACCGGCGTCGCGTTGTGCGTGTTGGACCTGTCGGGGCTCAAGGCGTTTTGCAACAAGACCCAGGTGCAAAGCCGTGAGCAGTTGCACGCCT GGTTGCAGGCCAACCCCACGGAGCGCAAGCAACTGCTCAAGGAGTTGCGCGTCACCGAGGTCAACCAGATGGCCGTGCGCCTGCTCAACGTCGCGTCCTG CGAGCAGGCGTGGGAACGCCTGATCGATGACTGCCCGCGCAATGCCACGTCCATCGGCTATCAGGTGCTGGAAGCCGTACTGACCCGGCAAAAACAGCTG GAGCTGGAAATCCAGCTCAACGACGTGGCCGGCAACGAACAGTACCTGTGGCTGGTGATGCGTTTGCCCGAGCAGCAGGATGACGTCAAGGCCGTGATTC TCAGCATCAGCGACATCACCAGCCGCAAGCTGATCGAGTTGTCGCTGGTGGAGCGTGAAAGCTTCTGGTCGGATGTGGTGCGCACCGTGCCCGACCACCT GTATGTGCAAGACGTGATCAGCCAGCGCATGATTTTCAGCAACCATCATTTGGGTCACACCCTGGGCTACAACAAAGCCGAGTTGCAGCAAATGGGTGAG TACTTCTGGGAAATCCTGCTGCACCCCGAAGACGCCGAGCACTACCATGACGCGCGCCAACAACAACGCCAGGTCGGCTATACGACCCAATTGCACTGCC AACTGCGCTTTCGTCACCGCAATAACCAGTGGCGCCGCTTCGATATCCGCGAACAGGCCCTGGCCCGCGATACGTCTACGGTGGTCACCCGGATCATCGG CGTGGCCAAGGACATTACCGACCAGATCGAGGCCAGTGAATCGCTGCGCGACAGTGAACAGCGCTACCGGATGCTGGCCGAAAGCATCAGCGACGTGATC TGCTCCACCGACAGCCAACTGGCCCTCAACTACATCAGCCCCTCGGTCAACACCGTCCTGGGCTATGACGTGGACTGGGTGTTCAAGAACGGCTGGCAGT CGATCGTTGCCAACCCTCAGCAGTTGACCGGCATTTACAGCCTGATGGAACAGGTCAGCCGCGCCCTCGGCAACCCCGACGCCTTGAACACCTTGCGCGA TGAACTGCAGACCCAACTGTTTCTGTTCGACTGCCTGCGCGCCGACGGGCGCAAGGTGCCGATAGAACTGCGCCTGGTGCTGGTGTGGGATGAACATGGC GCGTTTGAAGGCATCCTCGGCGTGGGCCGCGATATCAGCCAGCAACGCCGCGCCGAAAAAGACCTGCGCATGGCGGCCACGGTATTCGAGCATTCCACCT CGGCGATCCTGATCACCGACCCGGCCGGTTATATCGTGCAAGCCAACGAGGCGTTCAGCCGGGTCAGCGGCTATGCGGTGAGCGATGTGCTCGACCAGTT GCCCAATATGCTCACCGTCGATGAGCAGCAGGAAGCCCATCTGCGTTATGTGCTCAAGCAATTGCACCAGCACAGCACCTGGGAAGGCGAGGTGTGGCTC AAGCGTCTCAATGGCGAGCATTACCCGGCCTGGGTGGGCATTACCGCGGTGTTCGACGACGAAGGCGACCTGGCCAGTTACGTGTGTTTCTTCAGCGATA TCAGCGAGCGCAAGGCCAGTGAGCAGCGCATCCACCGCCTGGCCTACTATGACGCCCTGACCCACCTGCCCAACCGCACGCTGTTCCAGGACCGCCTGCA CACCGCGTTGCAGTCCGCCGAACGGCAGAAGTCGTGGGTGGTGCTGATGTTCCTCGACCTCGACCGTTTCAAGCCGATCAACGACTCCCTCGGCCACGCG GCCGGCGACCGGATGCTCAAGGAAATGGCCACGCGCCTGCTCGGCTGCGTGGCCGAGGACGACACCGTGGCGCGCATGGGCGGCGACGAATTCACCTTGC TCCTGCAACCACGGGTCAGCCGCGACATGGCGCTGAACCGCGCCATTCATGTGGCCGAGCAGATCCTCGCCAGCCTGGTCAAACCTTTTGTGCTGGAGGG CCGCGAATTCTTCGTGACCGCCAGTATCGGCATCGCCCTGAGCCCGCAAGACGGCAACGAGCTGAGCCAATTGATGAAAAACGCCGACACGGCGATGTAT CACGCTAAAGAGCGCGGCAAGAACAACTTCCAGTTCTACCAGGCCGACATGAACGCCAGCGCCCTGGAGCGCCTGGAACTGGAAAGCGACCTGCGCCACG CCTTGGACCAGAACGAATTCGTGCTCTATTACCAGCCGCAATTCAGCGGCGACGGCAAACGCCTGACCGGCGCCGAAGCCCTGCTGCGCTGGCGCCACCC GCGCCGTGGCCTGGTACCGCCCGGGGACTTTATCCCGGTGCTGGAAGAGCTCGGGCTGGTGGTGGATGTGGGCGACTGGGTGATCGGCGAAGCCTGTCGC CAGCTCAAGACCTGGCACCAGAACAAGGTGCGAGTCCCTAAAGTCTCGGTAAACATCTCGGCGCGGCAGTTCTCCGACGGCCAACTGGGCACGCGTATCG CCACCATTCTCAAGGACACCGGCCTGCCGCCGGCGTGCCTGGAGCTGGAACTGACCGAAAGTATCCTGATGCGTGAAGTCAACGAAGCCCTGCAGATCCT CGCCAGCCTGAAAAACCTGGGCTTGAGCATCGCGGTGGATGACTTTGGCACCGGCTATTCGTCGCTCAACTACCTCAAGCAATTCCCCATCGATGTGCTG AAGATCGACCGCACCTTCGTCGACGGCCTGCCCTCGGGTGAGCAGGACGCACAGATTGCCCGGGCGATCATTGCCATGGCCCACAGCCTGAACCTGGCGG TGATTGCCGAAGGGGTGGAAACCCATGAGCAGTTGGACTTCCTGCGTGAGCATGGCTGTGATGAGGTGCAGGGTTACCTGTTCGGGCGGCCAATGCCGGC GAATCGGTTTGAGGTGCAGTTCAGTAATGATGCGCTGTTCATGTTTGACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AAGTGCCGTCCCTGATCGTTCCCACGCTCCGCGTGGGAACGCAATTCTGGACGCTCTGCGTCCGCTTTTAAATGTGACGCAGAGCGCCACGGGATGCATT CCCACGCAGAGCGTGGGAACGATCAGGGGCTGAGTGAAAACCACTTGTCCGCGACATGATGTCCTTTCATATGCCATCTAAAACCCATTGGGTTAGAATG CCCTCCTTTTCTGCCCCCGATCCTTGAGGACCGCCATGTTCAGCCGTGATTTGACTATTGCCAAGTACGACGCCGATCTCTTCGCCGCCATGGAGCAAGA AGCCGTGCGCCAGGAAGAGCACATTGAGCTGATCGCTTCGGAAAACTACACCAGCCCTGCGGTGATGGAGGCTCAAGGTTCGGTTCTGACCAACAAGTAC GCCGAAGGCTACCCAGGCAAGCGCTACTACGGTGGTTGCGAGTACGTCGACGTGGTTGAGCAGTTGGCCATCGACCGTGCAAAAGAGCTGTTCGGCGCCG
Amino Acid Sequence
>putative sensory box GGDEF/EAL domain-containing protein
MSNVTPPTPLRAAHIAPGAPLHGTLKGALATLVLLLLALLFWQLLDQLQQNQKNQQQYTIDYSADLAEQISQNMALSAQIALNLLPIVEPPRNAEQQQAL MRTLQRSLPDLRSFALLAPSGALISDTAEGSQDSALLEDLVKRSHAQSYYLSNDNDGTVIYLLLHQPSGGSKVYWALRLAPNYLANLTRQDVQGQRPMWA IENSLNHRVVSRDSGMPAQWSGALTPEELNRSVLVTPLSKSDWQLRGMFDRSAVLEQLLPAFIGKCLLGLAFSLIPVIVLLNMRRRQRQVNEGRRRYQDI FEGTGVALCVLDLSGLKAFCNKTQVQSREQLHAWLQANPTERKQLLKELRVTEVNQMAVRLLNVASCEQAWERLIDDCPRNATSIGYQVLEAVLTRQKQL ELEIQLNDVAGNEQYLWLVMRLPEQQDDVKAVILSISDITSRKLIELSLVERESFWSDVVRTVPDHLYVQDVISQRMIFSNHHLGHTLGYNKAELQQMGE YFWEILLHPEDAEHYHDARQQQRQVGYTTQLHCQLRFRHRNNQWRRFDIREQALARDTSTVVTRIIGVAKDITDQIEASESLRDSEQRYRMLAESISDVI CSTDSQLALNYISPSVNTVLGYDVDWVFKNGWQSIVANPQQLTGIYSLMEQVSRALGNPDALNTLRDELQTQLFLFDCLRADGRKVPIELRLVLVWDEHG AFEGILGVGRDISQQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVSDVLDQLPNMLTVDEQQEAHLRYVLKQLHQHSTWEGEVWL KRLNGEHYPAWVGITAVFDDEGDLASYVCFFSDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLHTALQSAERQKSWVVLMFLDLDRFKPINDSLGHA AGDRMLKEMATRLLGCVAEDDTVARMGGDEFTLLLQPRVSRDMALNRAIHVAEQILASLVKPFVLEGREFFVTASIGIALSPQDGNELSQLMKNADTAMY HAKERGKNNFQFYQADMNASALERLELESDLRHALDQNEFVLYYQPQFSGDGKRLTGAEALLRWRHPRRGLVPPGDFIPVLEELGLVVDVGDWVIGEACR QLKTWHQNKVRVPKVSVNISARQFSDGQLGTRIATILKDTGLPPACLELELTESILMREVNEALQILASLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVL KIDRTFVDGLPSGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLDFLREHGCDEVQGYLFGRPMPANRFEVQFSNDALFMFD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site