Pseudomonas sp. CFT9, CFT9_14063 (carB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CFT9 soap_scaffs_T9.Contig45, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGACTACGCTATCCAGGCCATCAAGGACGTACTGGAGACCGAGATTCCGGTGTTCGGCATCTGCCTTGGCCACCAGTTGCTGGCTTTGGCCTCCGGCGC CAAGACCCTGAAAATGGGCCACGGCCACCACGGTGCCAACCACCCGGTACAAGACCTGGACACCGGCGTTGTGATGATCACCAGCCAGAACCACGGTTTT GCGGTGGATGAAGCCTCCCTGCCGAGCAATGTGCGCGCCATTCACAAGTCGCTGTTCGACGGCTCCCTGCAAGGCATCGAGCGCACCGACAAGAGCGCGT TCAGCTTCCAGGGCCACCCTGAAGCCAGCCCGGGCCCGAACGACGTAGCGCCGCTGTTCGACCGTTTCATCAATGAGATGGCCAAGCGACGCTGACTGAG TGGCCTGCGGGCGGCCCCGGATTGCGGTGGCCCCCGCAGGCTCTTCAAAGATTGTTCAAGACGGCTTGCCGACTGACCTGCGGATTTGAGTGACAAACCC
DNA Sequence for Gene
>CFT9_14063 |carB
ATGCCAAAACGTACAGACATAAAAAGCATCCTGATTCTTGGCGCTGGCCCGATCGTGATCGGCCAGGCCTGCGAATTCGACTACTCCGGCGCCCAGGCCT GTAAAGCCCTGCGCGAGGAGGGCTACCGCGTCATCCTGGTGAACTCCAACCCGGCCACCATCATGACCGACCCGGCCATGGCCGACGCCACCTACATCGA GCCGATCAAGTGGCAGACCGTTGCCAAGATCATCGAGAAAGAGCGTCCGGACGCGCTGCTGCCAACCATGGGTGGCCAGACCGCTCTGAACTGCGCCTTG GACCTGGAGCGCGAAGGCGTCCTGGAAAAGTTCGGCGTAGAGATGATCGGTGCCAATGCCGACACCATCGACAAGGCTGAAGACCGTTCGCGTTTCGACA AGGCCATGAAGTCCATCGGCCTGGCGTGCCCACGTTCCGGTATCGCCCACAGCATGGAAGAGGCCAATGCGGTCCTCGAGACCCTGGGCTTCCCGTGCAT CATCCGTCCGTCCTTCACCATGGGCGGCACCGGCGGTGGTATTGCTTACAACCGTGAAGAGTTCGAAGAAATCTGCGCGCGTGGCCTGGACCTGTCGCCG ACCAAAGAGCTGCTGATCGACGAATCGCTGATCGGCTGGAAAGAATATGAGATGGAGGTTGTCCGCGATAAGAAGGACAACTGCATCATCGTCTGCTCCA TCGAAAACTTCGACCCGATGGGCGTGCACACCGGTGACTCGATCACCGTGGCGCCAGCACAGACCCTGACCGACAAGGAATACCAGATCCTGCGTAACGC CTCCTTGGCGGTATTGCGCGAGATCGGCGTTGAAACCGGCGGTTCCAACGTCCAGTTCGGCATCTGCCCGGACACCGGCCGCATGGTCGTGATCGAGATG AACCCACGTGTATCGCGTTCTTCGGCGCTGGCCTCGAAAGCGACCGGTTTCCCGATTGCGCGTATCGCTGCCAAGCTGGCTATCGGCTACACCTTGGACG AGCTGCAAAACGAAATCACCGGCGGCGCTATGCCGGCGTCTTTCGAACCGTCTATCGACTACGTCGTGACCAAGCTGCCGCGCTTTGCCTTCGAGAAATT CGCCAAGGCGGATGCGCGCCTGACCACCCAGATGAAGTCGGTCGGTGAAGTCATGGCCATCGGCCGCACGTTCCAGGAATCCCTGCAGAAAGCGCTGCGC GGCCTGGAAGTCGGTGTTTGCGGCCTGGACGAGAAGCTCGACCTGAGCAACCCGGAAAGCATGAGCATCCTCAAGCGCGAGCTGACCGTGCCGGGCGCCG AGCGTATCTGGTACGTGGCTGACGCCTTCCGTGCCGGCCTGAGCGTCGAAGATATCTTCGGCATGAACATGATCGACCCGTGGTTCCTGGTGCAGATCGA AGATCTGATCAAGGAAGAAGAGAAGGTCAAGACGCTGGGTCTGTCGTCTATCGACCGCGACCTGATGTTCCGCCTCAAGCGCAAAGGCTTCTCCGACCAG CGTCTGGCCAAGCTGCTGGGTGTGACCGAGAAGAACCTGCGTACTCATCGCCACAAGCTGGATATCTTCCCGGTCTACAAGCGCGTTGACACCTGCGCCG CAGAATTCGCCACCGACACGGCCTACATGTACTCCACCTATGAGGAAGAGTGCGAAGCCGCGCCGACGGGCCGCGACAAGATCATCATCCTGGGTGGCGG TCCGAACCGTATCGGCCAGGGCATCGAGTTCGACTACTGCTGCGTACACGCCGCCCTCGCCCTGCGCGAAGACGGGTACGAGACCATCATGGTCAACTGC AACCCGGAAACGGTTTCCACTGACTACGACACGTCCGACCGTCTGTACTTCGAGCCGGTAACGCTGGAAGACGTATTGGAAATCTGTCGGGTCGAGAAGC CTAAAGGCGTGATCGTCCAGTACGGCGGCCAGACCCCGCTGAAACTGGCGCGTGCCCTCGAAGCCGCTGGCGTGCCGATCATCGGTACCAGCCCGGATGC AATCGACCGTGCCGAAGACCGTGAGCGTTTCCAGCAGATGGTTGAGCGCCTGAACCTGCGTCAGCCGCCGAACGCCACCGTGCGCAGCGAAGACGAAGCC ATTCGCGCGGCCAGCAAGATCGGCTATCCGCTGGTGGTGCGTCCGTCCTACGTACTGGGCGGCCGGGCGATGGAAATCGTCTACGAAGAAGAAGAACTCA AGCGCTACCTGCGTGATGCGGTGAAAGTCTCCAACGACAGCCCGGTGCTGCTGGACCACTTCCTCAACTGCGCCATCGAAATGGACGTGGACGCGGTCTG CGACGGTACTGACGTCGTGATCGGCGCCATCATGCAGCACATCGAACAAGCCGGCGTTCACTCCGGTGACTCCGCGTGCTCCCTGCCGCCGTACTCGCTG CCGGCGCATATCCAGGACGAGATGCGCGAACAGGTCAAGAAGATGGCCCTGGAACTGGGTGTGGTCGGCCTGATGAACGTACAGTTGGCGCTGCAAGGCG AAGACATCTACGTCATCGAAGTCAACCCGCGTGCCTCGCGTACCGTACCGTTCGTGTCCAAGTGCATCGGTGTGTCCCTGGCCATGATCGCTGCGCGTGT GATGGCTGGTAAGACCCTGAAGGAAATCGGCTTTACCAAGGAAATCATTCCGAACTTCTACAGTGTGAAAGAGGCGGTGTTCCCGTTCGCTAAATTCCCT GGCGTGGACCCAATCCTGGGCCCAGAGATGAAGTCCACCGGTGAGGTGATGGGTGTGGGCGATACCTTCGGTGAAGCGTTCGCCAAGGCCCAGATGGGTG CCAGCGAAGTGCTGCCGACCGGCGGTACTGCGTTTATCAGCGTACGTGATGACGACAAGCCACTGGTTGCAGGGGTCGCCCGCGATCTGATCAACTTGGG CTTTGAAGTCGTGGCTACCGCCGGGACCGCCAAGCTGATCGAAGCTGCCGGCCTGAAAGTACGTCGCGTGAACAAGGTGACGGAAGGCCGTCCGCATGTG GTCGACATGATCAAGAATGACGAAGTCACTCTGATCATCAACACCACCGAAGGTCGCCAGTCGATCGCGGACTCCTATTCCATTCGTCGTAATGCCTTGC AGCACAAGATTTACTGCACCACTACCATTGCTGCTGGCGAAGCTATCTGTGAAGCGCTGAAGTTCGGTCCGGAAAAGACCGTGCGTCGCTTGCAGGATCT ACACGCAGGATTGAAGGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCATAACCAAATACCCGATGACCGTTCAGGGCGCGCGCGCCCTGGAAGAGGAGCACGCCCATCTGACCAAGGTCGTACGTCCAAAGCTGAGCCAGGACAT CGGTACGGCCCGCGAGCTGGGTGACTTGAAGGAAAACGCCGAATACCACGCTGCTCGCGAGCAGCAGGGTATGGTCGAGGCGCGGATTCGTGACATCGAA GGCCGTATGCAGAATGCGGTGATCATCGATGTCACCACCATCCCGCATACCGGCAAGGTAATTTTCGGCACGACCGTGGAAATCGCCAACGTCGAGACCG ACGAAAGCGTGACTTACCAGATCGTGGGTGAGGATGAGGCTGACTTCAAGCAAGGCAAGATCTCTGTCGGCTCGCCGATTGCTCGCGCCCTGATTGCCAA GGAAGAAGGCGACGTGGTTGCCGTGAAAACGCCGAGCGGCGTCATTGAGTACGAGATTGTCGAAGTTCGTCACATCTGAAAGACGGCGCCCGCTGCGTGC
Amino Acid Sequence
>carbamoyl phosphate synthase large subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMADATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCAL DLEREGVLEKFGVEMIGANADTIDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLETLGFPCIIRPSFTMGGTGGGIAYNREEFEEICARGLDLSP TKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEM NPRVSRSSALASKATGFPIARIAAKLAIGYTLDELQNEITGGAMPASFEPSIDYVVTKLPRFAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALR GLEVGVCGLDEKLDLSNPESMSILKRELTVPGAERIWYVADAFRAGLSVEDIFGMNMIDPWFLVQIEDLIKEEEKVKTLGLSSIDRDLMFRLKRKGFSDQ RLAKLLGVTEKNLRTHRHKLDIFPVYKRVDTCAAEFATDTAYMYSTYEEECEAAPTGRDKIIILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC NPETVSTDYDTSDRLYFEPVTLEDVLEICRVEKPKGVIVQYGGQTPLKLARALEAAGVPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEA IRAASKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLRDAVKVSNDSPVLLDHFLNCAIEMDVDAVCDGTDVVIGAIMQHIEQAGVHSGDSACSLPPYSL PAHIQDEMREQVKKMALELGVVGLMNVQLALQGEDIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEIIPNFYSVKEAVFPFAKFP GVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGGTAFISVRDDDKPLVAGVARDLINLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHV VDMIKNDEVTLIINTTEGRQSIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRRLQDLHAGLKA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site