Pseudomonas sp. CFT9, CFT9_11416

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CFT9 soap_scaffs_T9.Contig38, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CACTTCATTACCCAGTACCCGTTCGAAGTGTCGCCGCTGGCCCGTCGCAACGACGACAACCCCAACGTCACCGACCGTTTCGAGCTGTTCATCGGTGGCC GCGAAATCGCCAACGCCTACTCCGAGCTTAACGACGCGGAAGACCAGGCCGAGCGTTTCATGGCTCAGGTGGCCGACAAGGACGCCGGTGATGACGAAGC CATGCACTACGATGCCGACTTCGTTCGGGCCCTGGAGTACGGCATGCCGCCGACTGCCGGTGAAGGTATCGGCATTGACCGTCTGGTGATGTTGTTGACC AACTCGCCGTCGATCCGCGACGTGATCCTGTTCCCGCACATGCGGCCGCAAGCGTAACCGTAGCGAAATCCGAAGCCGCCTTTTATAAGGCGGCTTTTTT ATGTGGCCTGTTCAAGTGGTGCTCGTCAGTGATCGTTCCCACGCTCCGCGTGGGAATGCACCCTCTGACGCTCCGCGTCACCTCTAAAGGAAGAAGTGTG
DNA Sequence for Gene
>CFT9_11416
GTGAACCGCGTAATAGCTCAAGAAGGTGCCGCCGGCATTGCTGCTGCCGTGGCTGAAAGCGTTCAGTACCAGGGCCGCAAGGCCAGCCGACGGGGCAGCG AGCAACGCCGGCAAGACATTCTCGATGCGGCCATGCGTATCGTCGTGCGCGATGGCGTGCGGGCCGTACGTCACCGGGCAGTGGCGGCAGAGGCGGGGGT GCCGCTGTCGGCCACCACCTATTACTTCAAAGACATCGACGACCTGCTCACCGATACCTTCGCCCAGTACGTGGAACGCAGCGCCGCTTTCATGGGCAAA CTGTGGGTGCGCAACGAAGGCCTGTTGCGCGAGATGGTCGCCTATGGCGATGGCAGTCCGGAGTCGCGCTCGCAACTGGCCGATGATATCGCGCGCCTGA CCGCTGACTATGTGCTGCGCCAACTGACCAACCGGCGCGAATACCTGATGGCTGAGCAGGCTTTTCGCCAGGAAGCCCTGCTGAACCCGCGGCTGGCCGA ACTGGTACGCTCCCATCAACAGATCCTGTTGCAGGGTACCGGGCAGTTTTTCCAGGTATTGGGCTCCCGTGAGCCGCAGCAGGATGCCAAGGTGTTGACG GCTATCATCAGTCGGATGGAATATCAGGGCCTGTTGGGCGGCGCAGAGCCTCTGACGGGTGACGAGATGCTTGAAATTCTCAAGCGTTACATGCACCTGG TATTGGCCTCGGTCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCTGTGCGCAATCTGCTTTGGGGGAGCTGGGCTTGCTGCTGAAGCCGTGCGCTACCTGCGCGTGGGCCAATAACGTTTAAAGAGGAAGCACCGGGTGGA CGATTACCAGCAGACGATACGCACCTTGTCCGATCGCATTGTGCTGGCGCAAACACCGATCCGCGTTCTCGATGCGGTGAAATGGGACGAAAACATTCGC CAGGGATTTCTCAAGGCCAAGGGCAAGGCGATGCCTGCCGTAGACCGCGATTACTACCTGAACCGACCGCTGTCGTTCGACTCCAGCGCGGTGAAGCTGG AATTCCAGAACATCGAGCGCGACATCACCCGTCGCCTTGGACAATTCAGCCCGGTGGGGCAGATCATGCGGCGCATGTGCCGCGAATACCGCATGGTGGT GCGCATGCTTGAAGCGCGCGGCACCGAGGACTTCGGTCTGATTTCCCAAGAGCTGTACGGCGCCGCCTCCGATGCGTTCCACGCCGGCGACCCGACCCTG
Amino Acid Sequence
>TetR family transcriptional regulator
MNRVIAQEGAAGIAAAVAESVQYQGRKASRRGSEQRRQDILDAAMRIVVRDGVRAVRHRAVAAEAGVPLSATTYYFKDIDDLLTDTFAQYVERSAAFMGK LWVRNEGLLREMVAYGDGSPESRSQLADDIARLTADYVLRQLTNRREYLMAEQAFRQEALLNPRLAELVRSHQQILLQGTGQFFQVLGSREPQQDAKVLT AIISRMEYQGLLGGAEPLTGDEMLEILKRYMHLVLASV
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site