Pseudomonas sp. CFT9, CFT9_10956

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CFT9 soap_scaffs_T9.Contig38, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCTCTCCGGCGGCCAGCAACAACGTGTGGCGATTGCCCGCGCCCTGGCCATGGACCCGATCGTCATGCTGTTCGACGAACCGACCTCGGCGCTGGACCCG GAAATGGTCAACGAAGTGCTCGACGTGATGGTGCAACTGGCCCACGAAGGCATGACCATGATGTGTGTGACCCACGAAATGGGCTTTGCGCGCAAAGTGG CCGACCGCGTGATCTTCATGGACGCCGGCAAGATCATCGAAGACTGCCCGAAGGAAGAGTTCTTCGGCGACATCAGCGCACGCTCCGAGCGTGCGCAGCA CTTCCTCGAGAAAATCCTGCAGCACTAAAAGCAACACCGTTCGTCCTGTAGGAGCCGGGCTTGTGTGGGAGCTGGCTTGCCTGCGATGGCATCGCCTCGG TGCAACTGTTACACCGAGGCGCCTGCATCGCGGGCAAGCCCGACTCCCACACAAGCCCGCTCTTACACTGGCGAGAAGTAGCTGACCCAAGGCATCTGTG
DNA Sequence for Gene
>CFT9_10956
ATGAAATGCGACCCCAATCAATATCGCGCCGCGCCGCCATCACTTGCCGTGAAGCCTCGTCTGATACGCCAACTGTTCCTGCCGCCGTTGATCATCGCCC TGATGGTCGGCCTGGGTTATATCGGCTTCTGGGTCAGTGACTACTACGGCATCCGCACCCTCAGCGACAACGGCGAACGCCAGTTGGAGCTGCACGCCCG CACCGTCGAAAGCGAACTGAGCAAGTACACCTACCTGCCCAGCCTGCTGGAACTGGAGTCCAGTGTTTCCCAACTGCTCGCCGACCCGAACCAGGAAACC CGCAAGACGGTCAACGACTACCTCGAAGGCCTGAACCGCCGCAGTCGCAGCCGCGCCATCTACGTGATGGACACCACCGGCCGCGTGCTGGCCACCAGTA ACTGGCGCGATGCCGACAGTTACCAAGGTGAGGACCTGTCCTTTCGCGCCTATTTCCAGAACGCCGTACGCGGCCAGCCCGGTCGTTTCTACGGCATCGG CAGCACCAACGGCGAACCCGGCTATTACCTGGCCCATGGCCTGGAAGAGCACGGCAAGATCATCGGCGTCGCTGTGGTCAAGGTACGCCTCGAAGCGCTA GAAGAGCGCTGGCAACGTGCGCGCCTCGAAGCTTTCGTGAGCGATGAGAACGGCATCATTATTCTTTCCAGCGACCCGGCGCGTCGCCTCAAGGCCGTAC GCCCGCTGAGCGATGACACCAAGGACCGCCTGGCCCACAGCCTGCAATATTACTGGGCGACGCTCAATGAACTGCAACCCCTGGCCCGTGAGCGCCTGAA CGAAGGCACCGAGAAACTGACCTTCCCGGCCAACACCGAAGTGGTCAACGACCAGCACGCGGTCAGCTACCTGGCGCAGACCCGCCCGCTGAACGACACG CCGTGGAACTTCACCCTGCTCACCCCGCTCAACGACCTGCGCCGCGCCGCGATCAACCAGGGCATCCTGGTGGCCGTCGCCTTCGGCCTGGTCGCCTTCC TGCTGATTGCCTGGAACGAGCGACGCAAGGTCATCGCCACCCGCCTCGCCGCACGGGAAGCCTTGCAGGAAGCCAACAGCCAGCTTGAGCGTCGGATTGC CGAACGCACCGCCGACCTGCGCGCCAGCAACGAACGGCTCAAGGGCCAGATTCGCGAACGACGCCAGGCCGAAGAAACCTTGCGCCGCGCCCAAGACGAA CTGGTACAGGCCGGCAAACTCGCGGCCATCGGCCAGATGTCCACCAGCATCGCCCACGAACTGAACCAGCCGCTGGCGGCCTTGCGCACGCTGTCGGGCA ACACCGTACGCTTCCTTGAGCGCGGCGCCCTGGACACCGCCAGCACCAACCTCAAGACCATCAACGAACTGATCGACCGCATGGGCCGCATCACCGCCAG CCTGCGCTCCTTTGCTCGGCGCGGCGACGACCAGGGCGAAGCCAGCCTCGGCAAGGCCGTGGACGCCGCGTTCCAGGTGCTCGGCGCGCGCCTGGACAGC CTGCCGTTGACCGTGCACCGTGACTTTGCCAACGCCCAATTGCAGATCGACCAGACCCGCCTGGAGCAGATCCTGGTCAACCTGATCGGTAACGCGCTCG ATGCCATGCAAGCCCAAGCGGTGCCGCAACTGTGGCTGGAAGGCCAGAGCGGCGATGGCAAATACCGCCTGTTGGTGCGTGATAATGGCCACGGCATCGA CCCCGAGGCGCGCAAGCATTTGTTCGAACCCTTTTTTACCACCAAGCCCGGCGAACAAGGCCTGGGCCTGGGCCTGACCCTTTCCGCAAGCCTCGCGGCC GCTACCGGCGGTAGCCTTGCCGTGGAACATCCGGCCAATGGTGGTACCGCCTTTGTCCTTAACCTGCCATTGGTGGGCGCTCAACGAGCTGAGTCGACAT GA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATACACAAGCCCAAGACCTTACCGTCCTGATCGTCGAAGACGACCCCCACGTACTGCTCGGTTGCCAGCAAGCACTGGCGCTCGAAGACATCACCAGCGT CGGCGTGGGCAGCGCCGAAGAAGCGCTCAAGCGCATCGGCGAGAACTTCGCTGGCATCGTCATCAGCGATATCCGCCTGCCGGGCATCGATGGCCTGGAA CTGCTGACCCGCCTCAAGGCCATGGATAAAAGCCTGCCGGTGGTGTTGATCACTGGGCATGGCGATATCTCCATGGCGGTGGGCGCCATGCGTAACGGCG CCTACGACTTCATGGAGAAACCCTTCTCGCCCGAACGCCTGGTGGACGTGGCACGCCGCGCCCTGGAACAGCGCGGCCTGGCGCGGGAAGTCTGGTCGTT ACGCCGGCAACTGGCCGAGCGCGACTCGCTGGAAGGCCGCATCATCGGCCGCTCGCCGGCGATGCAAAACCTGCGTGAACTGATCGCCAACGTCGCCGAC
Amino Acid Sequence
>sensor histidine kinase
MKCDPNQYRAAPPSLAVKPRLIRQLFLPPLIIALMVGLGYIGFWVSDYYGIRTLSDNGERQLELHARTVESELSKYTYLPSLLELESSVSQLLADPNQET RKTVNDYLEGLNRRSRSRAIYVMDTTGRVLATSNWRDADSYQGEDLSFRAYFQNAVRGQPGRFYGIGSTNGEPGYYLAHGLEEHGKIIGVAVVKVRLEAL EERWQRARLEAFVSDENGIIILSSDPARRLKAVRPLSDDTKDRLAHSLQYYWATLNELQPLARERLNEGTEKLTFPANTEVVNDQHAVSYLAQTRPLNDT PWNFTLLTPLNDLRRAAINQGILVAVAFGLVAFLLIAWNERRKVIATRLAAREALQEANSQLERRIAERTADLRASNERLKGQIRERRQAEETLRRAQDE LVQAGKLAAIGQMSTSIAHELNQPLAALRTLSGNTVRFLERGALDTASTNLKTINELIDRMGRITASLRSFARRGDDQGEASLGKAVDAAFQVLGARLDS LPLTVHRDFANAQLQIDQTRLEQILVNLIGNALDAMQAQAVPQLWLEGQSGDGKYRLLVRDNGHGIDPEARKHLFEPFFTTKPGEQGLGLGLTLSASLAA ATGGSLAVEHPANGGTAFVLNLPLVGAQRAEST
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site