Pseudomonas sp. CFT9, CFT9_05136
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. CFT9 soap_scaffs_T9.Contig9, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CACGATGCCGTCGGCCGCGCGAGTGCCAGGGCGTGCAGCCTGGTAGGTGCCCAACTGTATGAACTGCCGATCTGGGCTTGGCATTGGCCGGCCCGGGAAA GCGCGGTAATGCCCTGGCAGCGTGCACGCAAGGTCCGCCTGGATACCTGGACCGTCGCGCGCAAGCTGCACGCCGCCCACGCCTACGCCAGCCAATTGGT GGGTGACCCGCAGATCGGCTTACCACCGATGCTCGCGCAGATATTGCTAGAGCGCATGCGCGAGCCCTACGAAATCCTGTTCACCTGACCACCACCCTGT AGGAGCGAGCTTGCTCGCGAAAAACCTCAACGATAACGCGGGTTTACTGAATTAACGCGGCGCCTGCGCGTCTTTCACGAGCAATCGCGCTCCTACAAAC GTTGGGCTTTTCCCTACAGACTCAATCTGCCAAACTGATGCGAATAATTATCAACAGATTTACTATTCGCCACGGAAGGCACTTGGGGAGCCCTACTTTC
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| DNA Sequence for Gene |
>CFT9_05136
ATGTTTGTGCAACAACGCGGCGGCAACGTTTTTACACCCAGTCTGATGGCAATCACTATCGCTTTAGCAACCTCCAATGCGGCCATTGCCGCCGACGCAC CGGCCACCATCGAGCTGGGCGCTACCGAGGTTTCGGGCCAACAGCTTGGCGCAACCACCGAAGGCAGCGAGTCGTACACCACCGGCTCGATGAAGACCGC AACCAAACTGCCGCTGACCCTGCGCGAAACCCCGCAGGCCGTCACCGTGATCACGCGCCAGCGCATGGATGACCAGGCCATGACCAGCATCAACGACGTG GTCAACGCCACGCCGGGGCTGTTCCTCAATTACTCCAACGGCCCTGGGCGACAAGGCTTTACCGCACGCGGTTTCGATATCGACAACCTCATGTATGACG GTATCCCCAGCGGCTACAACGGTGCGTCGGTAGGCGCCCAGCCGAACCTGGCGATGTTCGACCGCGTCGAAGTGGTGCGCGGCGCTACCGGCCTGGTGAC CGGCGCAGGCAACCCTTCGGCCGCCATCAACCTGATCCGCAAGCGGCCACTGGATGAGCAGAAAGTCACGCTCACCGGCGCCGTCGGCAGCTGGGACGAC TACCGTGGCGAGTTCGACGCCTCCAGCCCACTCAATGACAGTGGCACCTGGCGTGGCCGTGTCGTCACCTCTTACCGCGATGCCAACAGTTTTATCGACA AGGCCGAGCAGGATCATGGCCTTTTCTATGCCGTCACCGAAGCCGACCTGAGCGAAGACACCACCCTGACCCTCGGTTACTCGAACCAGAAGGACAAGAC CAACTACTTCTGGGGCGCTTCGATGGTCGGCCTGGATGGACGCCACCTGGGCCTGTCGCGCGCCTATAACCCAGGCACCGATTGGGAGAACAAGGACCAG GAAATCAACACCCTGTTCGCTGAGTTGCGCCAGCGCCTGGCCAACGACTGGAGCCTGCAGGTCAACGCCAACTACGCCGAACAGAACGCCTTGTTCTCCG GCTCCTACCAATCGCGCTGGACCAACGACACCCTGGCCCGCACGGTGTACCAGGCCACCTACGATGAAAACCAGGCCGGGCTCGACGCCTTTGCCAGCGG CCCGTTCGAGGCGTTCGGCCGCACCCATGAACTGGTGGTGGGCGCCAGCAAGCGCATCTACGACATGACCACCCACAACTACAGCCCGTACGACCTCAAC TGGCCGATCAATGCGGGCAAACCGAACTTCACCCGCACCAACAACGTTCGCGAAGTCACCACCCAGGACGGTTTCTACCTGACCAGCCGCCTGAGCCTGG CCGACCCGCTGAAGCTGATCCTCGGCGCTCGCCTGGACTGGTACGACTACGACAACCGTGATGCCGCTGGCGACTACAAGGTCACCCGCAACCTCACCCG CTACGCCGGCCTGATCTACGATCTGGACGACCAGCATTCGGTTTATGTGAGCTACAGCGACATCTTCACGCCGCAAAAAGACAAGAGCACAGCCGGCACT CCGCTCAAACCCATCGTCGGTAAAAATTATGAGGTGGGCGTCAAAGGCGAATACTTCGGTGGCACGTTGAATGCCAGCGTAGCGCTGTTCCGTGTCGACC AGGAAAACCGCGCCGTGGCCGTGGTGGTGCCCAACTGCCCGCAGGCGTCCTGTGCCGAGGCCTCGGGCGAAATCCGCAGCCAGGGTATCGACTTCGAACT GCAAGGCGCCTTGACCGAAAACTGGCAGGTCGGCGGCGGCTATACCTATGCGCGCACCCACACCATCAAGGACGACGCCAACCCGCAGAAGGTCAACAAG CAGTTCGATACCGACATCCCGGAACATCTGTTCAAAGTGACCACCCGCTATAACTTCCAGGGCCCGCTGGAAAAACTCCGCGTCGGCGGCAATATCTCCT GGCAGAGCCGCATGTACAACGACATCAAGCTAGCGGATGGCAGCAACTACCGGCTCCAGCAAGGCGGCTACGCCGTCACTGACTTGATGGCAGGCTACCG GGTCAATCAGCATCTGGATTTGCAACTCAACGCCAACAACATCTTTGATCGCCACTACTACCAGTCCATCTCCAACTCAGTGACTTATGGCGGCGACTCC TATGGCAGCCCCCGCAACATGATTTTGACTGCCAAGTACAGTTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCTCATGCCCACCTCGGCTGCCCGCTCGGGCAGCCGTTCTTAAAGTCCCGCGCCCGCGTGCCGATAACGCGTGGGTAACCGGCAACAATCCTGAACATC TGCTTCACTCCACAGCGGCGCGCCTGTATGGCACACCGCGTGCTTGCTTGACCTCGACGCCCCCTCTCATGGAGTAAGAGTGAATGCCCGTCCGTTTTCT CGAGCACTATCGCAAGGCCGACCGCATCATGCTGGCATTGATCTGGCTGATGTGCCTGTTCTCCCTCGCCCTGGCGTTCTGGCACGACACCCTCATTCAG GCCGTGATCGTCGGTGGCGGCACCGGCGTGGTGCTCACGGCGCTGTATCGCGTCATTGGCGGCACCCGGGTGATGCGCTGTGCACTGGGCGCCGGCTTGA TGGTGATGGCGGCGTTGCACATCAACCAGGCGCACGGGGTGATCGAATCCCACTTCGGTATTTTCGCGCTGTTGGCGGTGCTGACCTTCTACCGTGACTG
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| Amino Acid Sequence |
>putative ferric alcaligin siderophore receptor
MFVQQRGGNVFTPSLMAITIALATSNAAIAADAPATIELGATEVSGQQLGATTEGSESYTTGSMKTATKLPLTLRETPQAVTVITRQRMDDQAMTSINDV VNATPGLFLNYSNGPGRQGFTARGFDIDNLMYDGIPSGYNGASVGAQPNLAMFDRVEVVRGATGLVTGAGNPSAAINLIRKRPLDEQKVTLTGAVGSWDD YRGEFDASSPLNDSGTWRGRVVTSYRDANSFIDKAEQDHGLFYAVTEADLSEDTTLTLGYSNQKDKTNYFWGASMVGLDGRHLGLSRAYNPGTDWENKDQ EINTLFAELRQRLANDWSLQVNANYAEQNALFSGSYQSRWTNDTLARTVYQATYDENQAGLDAFASGPFEAFGRTHELVVGASKRIYDMTTHNYSPYDLN WPINAGKPNFTRTNNVREVTTQDGFYLTSRLSLADPLKLILGARLDWYDYDNRDAAGDYKVTRNLTRYAGLIYDLDDQHSVYVSYSDIFTPQKDKSTAGT PLKPIVGKNYEVGVKGEYFGGTLNASVALFRVDQENRAVAVVVPNCPQASCAEASGEIRSQGIDFELQGALTENWQVGGGYTYARTHTIKDDANPQKVNK QFDTDIPEHLFKVTTRYNFQGPLEKLRVGGNISWQSRMYNDIKLADGSNYRLQQGGYAVTDLMAGYRVNQHLDLQLNANNIFDRHYYQSISNSVTYGGDS YGSPRNMILTAKYSF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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