Pseudomonas sp. CFT9, CFT9_04246

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CFT9 soap_scaffs_T9.Contig9, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GAGCGCAGCACGTTCATCCCGATCCTGGCCAACGGCTTTGCCCGCCACACCACGGAAATCCTGGTGCACCACGCCGAACGTGAGCACGGCGAATCCAAAT ACAGCGCCATGCGCCTGATCAGCCTGATGTTCGACCTGCTGACCTGCATGACCACCACGCCCTTGCGCCTGCTGTCCATCGTCGGTTTCAGCCTGGCGGC ACTGGGCGTGCTGTTTGCCTTTGCCCTGATCGTCATGCGCCTGGCCTTCGGCGCCGACTGGGCTGGCGATGGCCTGTTCGTGCTGTTTGCGGTGCTGTTT GTGTTCACCGGTGGCCAGTTCATCGGCATGGGTCTTTTGGGCGAATACCTGGGCCGCATGTACAGCGATGTCCGCGCCCGCCCACGCTTCTTTATTGAAA AAGTGCTGCGCAACCAACCGGCAGCACCGGCTCCAGTCGTCGTGGTCGACGGCCTGGTGTCTTCCCATACTTCTACTTCTTCTTCGGATCAGGTCCAGTC
DNA Sequence for Gene
>CFT9_04246
ATGAGTTCAAAAGCTGTTGTATTCGCCTACCACGATATTGGCTGCGCAGGCATTGAAGCGCTGCTCAGCGCCGGTTACGACATTGCCGCCGTGTTCACCC ATGCCGATGACCCCAAGGAAAACAACTTCTACGGTTCCGTCGCCCAACTCTGCGCCCGCAATGGCATCCCGGTGCATGCACCGGAAGACGCCAACCACCC GCTGTGGATCGAACGCATCGCCAAGCTGAACCCGGAGTACATCTTCTCGTTCTACTACCGCAACCTGCTGAGCGAGCCGCTGTTGGCCACCGCCCGCAAA GGCGCGTTCAACCTGCACGGCTCGTTGCTGCCCAAGTACCGTGGCCGCGCCCCGGCCAACTGGGTGCTGGTCAACGGCGAAACCGAAACCGGCGTGACCC TGCATCGCATGGTCAAGCGTGCCGATGCCGGCGCCATCCTGGCCCAGCAGAAAGTCACCATCGAGCGCACCGATACCGGCCTGAGCCTGCACGCCAAGCT GCGTGAGGCGGCCACGGCGCTGCTGCGTGATGCCCTGCCACAGCTGGCCCAGAGCAAGCTGATCGAAACCGCCCAGGATGACAGCAAAGCCACCTACTTC GGTCGTCGCACCGCCGCCGATGGCAAGCTGGACTGGAAAAAGCCCGCCGAGCAACTGTTCAACCTGGTACGCGCAGTGACCCAGCCGTACCCGGGCGCCT TCTGCGCCGTGGGCGAGCACAAGCTGATCGTGTGGCAAGCCGACGTGGTCAAGGGCAACGAAGGTCTGGCGCCTGGCCGTGTAATCAGCGTCAACCCGCT GCGCATTGCCTGCGGTGAAGATTCCCTGGTGGTCAAGTTCGGCCAGCGCAACGAAAACGGCCTGTACCTGGCCGGCCCGTCCCTGGCCGATGAACTGGGC CTGGTGGATGGCTCCGTGCTACGCGGCGCCGAGTCGGGTCGCAAGCCGCGCCGTACCCGTGTGCTGATCCTGGGCGTGAACGGTTTTATCGGTAACCACT TGTCCGAGCGCCTGCTGCGTGACGACCGCTACGAAGTCTATGGCCTGGACATCGGCTCCGACGCCATCGAGCGCCTGCGCAGCCACCCCAACTTCCATTA CGTGGAAGGCGACATCAGCATCCACACCGAGTGGATCGAGTACCACATCAAGAAATGCGACGTGGTGCTGCCGCTGGTGGCCATCGCCACGCCGATCGAA TACACCCGTAACCCGCTGCGCGTATTCGAACTGGACTTCGAAGAAAACCTCAAGCTGGTGCGCTACTGCGTCAAGTACAACAAGCGCGTGATTTTCCCGT CGACCTCCGAAGTCTATGGCATGTGCCAAGACCAGTATTTCGACGAAGACACCTCCAACCTGGTAGTGGGCCCGGTCAACAAGCAACGCTGGATCTACTC CGTCTCCAAGCAACTGCTGGACCGCGTGATCTGGGCCTACGGCGACAAGGGCCTGAAGTTCACCCTGTTCCGGCCATTCAACTGGATGGGCCCGCGCCTG GACCGCCTGGACTCGGCGCGTATCGGCAGCTCCCGCGCCATTACCCAGCTGATCCTGAACCTGGTGGAAGGCACGCCGATCCGTCTGTTCGACGGCGGTG AGCAGAAGCGTTGCTTCACCGACATTGCCGACGGCATCGAAGCCCTGGCGCGCATCATTGATAACGACAATGGCGTCTGCGACGGCCAGATCATCAACAT CGGCAACCCCGAAAACGAAGCCAGCATCCGCCAGTTGGGCGAAGAACTGCTGCGTCAGTTCGAGGCTCACCCACTGCGCCACAACTTCCCGCCGTTCGCC GGTTTCCGCGACGTCGAGAGCAAGGCGTTCTACGGCACAGGCTACCAGGACGTGGCGCACCGCAAGCCGAGCATCGACAACGCCAAGCGCCTGCTGAACT GGGAGCCGAGCGTAGAGATGAGCGAAACCATCGGCAACACGCTCGATTTCTTCTTGCGTGAAGCCATGCTTGAAATTGCGGATAAAAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGCAGGCAGGTCTTCGCATCGACGTCGACACCTACCGCGGCACCCGTGAAGGTGTGCCGCGGTTGCTCGACTCCCTGGCCGAAGCCGGGGTCAAGGCGAC GTTCTTCTTCAGTGTCGGGCCGGACAACATGGGGCGTCACTTGTGGCGCCTGATCCGCCCGCAGTTCCTGTGGAAGATGCTGCGCTCCAACGCGGCCGGC CTGTATGGCTGGGACATCTTGTTGGCCGGCACTGCCTGGCCAGGCAAGCCGATTGGCCGAGACCTGGGGCATTTGATGCGCCAGGCCAAGGCGGCCGGGC ATGAAGTCGGCCTGCACGCCTGGGACCACCATGGCTGGCAAGCCAACACCGGGCGTTGGAGCGAGGCCCAACTGGTCGAGCAGATTCGACGCGGCGTAGA CACCTTGAGCGACATCCTCGGCGAACGCATCGACTGTTCAGCGGCCGCCGGCTGGCGTGCCGATGAGCGTGTGGTGCAAGCCAAGCAAGGCTTCAACTTT
Amino Acid Sequence
>bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase
MSSKAVVFAYHDIGCAGIEALLSAGYDIAAVFTHADDPKENNFYGSVAQLCARNGIPVHAPEDANHPLWIERIAKLNPEYIFSFYYRNLLSEPLLATARK GAFNLHGSLLPKYRGRAPANWVLVNGETETGVTLHRMVKRADAGAILAQQKVTIERTDTGLSLHAKLREAATALLRDALPQLAQSKLIETAQDDSKATYF GRRTAADGKLDWKKPAEQLFNLVRAVTQPYPGAFCAVGEHKLIVWQADVVKGNEGLAPGRVISVNPLRIACGEDSLVVKFGQRNENGLYLAGPSLADELG LVDGSVLRGAESGRKPRRTRVLILGVNGFIGNHLSERLLRDDRYEVYGLDIGSDAIERLRSHPNFHYVEGDISIHTEWIEYHIKKCDVVLPLVAIATPIE YTRNPLRVFELDFEENLKLVRYCVKYNKRVIFPSTSEVYGMCQDQYFDEDTSNLVVGPVNKQRWIYSVSKQLLDRVIWAYGDKGLKFTLFRPFNWMGPRL DRLDSARIGSSRAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGIEALARIIDNDNGVCDGQIINIGNPENEASIRQLGEELLRQFEAHPLRHNFPPFA GFRDVESKAFYGTGYQDVAHRKPSIDNAKRLLNWEPSVEMSETIGNTLDFFLREAMLEIADKK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site