Pseudomonas sp. CFT9, CFT9_02593
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. CFT9 soap_scaffs_T9.Contig5, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CACCAACCTGAACCTGGAAGACATGGTGCGCGATGGCCGGTTCCGTGAAGACTTGCTCTACCGCCTGAATGTCATCACCTTGCACTTGCCGCCGCTGCGC GAACGCAGTGAAGACATCCTGACCCTGGCTGACCGCTTCCTTGCCCGCTTCGTCAAGGAATACGCACGCCCGGCACGCGGCTTCAGTGATAATGCCCGCG AAGCGCTACTCAACTATCGCTGGCCCGGCAACATCCGCGAACTGCGTAACGTGGTGGAACGCGCCAGCATCATCTGCCCTCAGGAAAAGGTGGAGATCAG CCACCTGGGGATGGCCGAGCAACCGGCCAACAATGCACCGCGTATCGGAGCGGCTTTGAGCCTGGACGAGCTGGAAAAAGCTCATATCGGCGCCGTACTT GCGACCAGCGACACGCTGGACCAAGCGGCCCGCACACTCGGCATCGATGCGTCGACGCTGTACCGCAAACGCAAGCAGTACAACCTTTGAACAGGACTTT
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| DNA Sequence for Gene |
>CFT9_02593
ATGAAGCTCGCGATGAAACTGCGCACCCGGTTATTCCTGAGCATCTCAGCGTTGATTACCGTGGCTTTGCTGGGGTTGATCCTGGGCTTGGTCAGCGTCA TGCAAATGGCCAAGACCCAGGAATCGTTGATCCGCAGTAATTTCATCACCCTGGACCTGGGGCTCAAGTTGCGTCAAAGCCTGGGCGACCAGTTGATCAT GATGCTGGAGAAGCGTCCCGACCCAGACGCCCTGCAAGCCTCAAAGCAGCATTATTTCGATCTGTTGGACCAGGGCATCGCCCATGAACAGGCCGACGGC AAAAACCATGGTTTCAGCCAGGCACGCTCGGATTACCAGAATCTGCTCAATGCGTTTGACCAATCCCAACAGGCATCACCGCCTGCGGGCAGCAAGGAAA GGCTCACCGAAACCTTCAACATACTGCGCAACGGCTTGATTGCCGAACACAAGCGGGCGCTGGAAAATATCAGTACCAGTGAGCATAAATCCCGTGAGCG CGCCTTGTTGATAGCGGGCCTGCTCGGGCTGGTGGGGCTCGCGGTGCTGATCATCGGTTTCGTCACGGCCCATGGCATCGCCCGGCGTTTCGGTGGTCCC ATCGAGGCCCTGGCCAAGGCCGCCGACAAGATCGGGCAGGGCGACTTTGAAGTCACGCTGCCGATCTCCTCCGCAGCGGAAATGAACCTGCTGACCCGCC GCTTCGGCATCATGGCCGAAGCGTTGCGCCAACATCAGGCCACTAACATCGATGAGCTGCTGGCCGGCCAACAGCGCCTGCAAGCGGTGCTCGACAGTAT CGATGACGGCCTGTTGATGATTGATCGCCAAGGCTGCCTGGAGCACCTCAACCCTGTGGCGCAGCGCCAATTGGGCTGGGATGAGGAGCGGCTGGGTCAA GGGCTTGGCGAAGCCATGGGTCGCGCGGAAATGGATGAACAGCTGCAACTGGTGCTACGCGGCGGCAACCTGGAGCGGGCCCCGGATGATCTGGAGGTGG AAGTCGAGGGTGAGTTACGCCTGCTGACCTACAGCCTGACCCCGGTTAGCCATACACAGGGGCACATTCTCGGGGCCGTGATGGTGCTGCATGACGTGAC GGAACAGCGCGCCTTCGAACGCGTGCGCAGCGAGTTCGTGTTGCGCGCCTCCCATGAGCTGCGCACGCCGGTTACCGGCATGCACATGGCCTTCGGCTTG TTCCGTGAGCGGGCCAAATTCCCTGCGGACTCCCGCGAGGCGGACCTGCTGGATACGGTCAATGAAGAGATGCAGCGCCTGATGCAGTTGATCAATGACC TGCTCAACTTCTCGCGTTACCAGAACGGCCTGCAAAAACTCACCCTGGGGACGTGCGATGTCACCGACTTGCTGGAGCACGCACGGGCCCGATTTGCTGA GCCTGCGAACGCCCAGCACATTGAGTTGCTGGTAGAAGCTCAACCTGAATTGCCACGGCTGTATGCCGACCAAGTGCAACTGGAGCGGGTGCTCGACAAC CTGCTGGGCAATGCCCTGCGCCACACCGCCGAAGGCGGGCAGATTCGTCTGCAGGCACGACGGCATGGTGAGCGGGTGATTATCAGCGTCGAGGATAACG GCGAAGGCATTGCCTACGGCCAGCAAGGGCGGATCTTCGAACCCTTTGTACAGGTGGGCCGCAAGAAGGGCGGTGCGGGCCTGGGCTTGGCACTGTGCAA GGAAATCGTGCAATTGCACGGCGGCCGCATGGGTGTGTACTCGCGGCCGGGGCAGGGTACGCAGTTCTATATGGCATTACCCCTGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAGAGAGCTTGCTCGCTCCTACCTGTACACCATCAGCGGTGATTCAAGGCCCGCAGGATTGCGGCACTTTCAGCATCCGGAGTGCCATCAAACAGCGATG GCCGGAAGCGCATCTGGAACGCGGCGATGACGTGCCGCGTGGCCACATCCAACTCGCCAGTCTGCGGCGTCTGGTAGCCCAGGCGCGCCAGCTCTTCCTG GAACCAGGTAATGCTTGGTAACTGCGCGGCGTACTGCACCTGGAACCGGGCCACTGCCTGGGCATCCGGCCACACGGCCAGACCTTCTGCCGCCAAGCGT TTCCAAGGGAACAACGGGCCTGGGTCCAGCTTGCGCAGTGGGGCGATGTCGCTGTGCCCGATGATGTTCTTGGGGTCGATGCCATTGCGCTTGCTGATGT CCTTGAGCAGCACGATCAGCGACTGCACCTGCGCTTCGGAATACGGGTACCACACACGCCCCGTGGGAGTATCACTGAACCCTGGGTTGACGATCTCGAT
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| Amino Acid Sequence |
>histidine kinase
MKLAMKLRTRLFLSISALITVALLGLILGLVSVMQMAKTQESLIRSNFITLDLGLKLRQSLGDQLIMMLEKRPDPDALQASKQHYFDLLDQGIAHEQADG KNHGFSQARSDYQNLLNAFDQSQQASPPAGSKERLTETFNILRNGLIAEHKRALENISTSEHKSRERALLIAGLLGLVGLAVLIIGFVTAHGIARRFGGP IEALAKAADKIGQGDFEVTLPISSAAEMNLLTRRFGIMAEALRQHQATNIDELLAGQQRLQAVLDSIDDGLLMIDRQGCLEHLNPVAQRQLGWDEERLGQ GLGEAMGRAEMDEQLQLVLRGGNLERAPDDLEVEVEGELRLLTYSLTPVSHTQGHILGAVMVLHDVTEQRAFERVRSEFVLRASHELRTPVTGMHMAFGL FRERAKFPADSREADLLDTVNEEMQRLMQLINDLLNFSRYQNGLQKLTLGTCDVTDLLEHARARFAEPANAQHIELLVEAQPELPRLYADQVQLERVLDN LLGNALRHTAEGGQIRLQARRHGERVIISVEDNGEGIAYGQQGRIFEPFVQVGRKKGGAGLGLALCKEIVQLHGGRMGVYSRPGQGTQFYMALPL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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