Strain | Pseudomonas sp. CFT9 soap_scaffs_T9.Contig1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATACGCTCACCGCAGATGGCTTCCTGCGCACGGGTGACAAGGGCGAGCAGGACGCGGACGGTCGCCTGCGCCTGACCGGACGCCTCAAGGAAATTTTCAA GACCAGCAAAGGCAAATACGTGGCCCCGGCGCCGATTGAAAACCGCCTGGCCGAACATGCACGTATTGAACAGGTGTGTGTGGTCGGCGAGGGGCTCAGC GCGCCGATAGGGCTGTGCGTGTTGTCGGCACCCGGCGAGGACCGCCAAGCCCTCGGCAGTGGTCTTGAACGCTGGCTGGCACAGGTGAACGCGGGTCTGG ACAAGCACGAACGCATGGGGCAATTGGTGGTGGTGAAAGACCACTGGGCGGTGGAAAACGGTTTTCTCACGCCGACCTTGAAGATCAAACGCAACGTGAT CGAGTCGACGTACGGGCCACAATTGCAAGCATGGAGCGCGCGCGCCGAAACCGTTCTGTGGCAGGATTAGGGTCGTAATAAAACCAACAAGGACAACCGT
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DNA Sequence for Gene |
>CFT9_00125
ATGAGCCTGTGGCGTACCCAACCGAATATCGAACACCTCAACGCGATCCAGAAAAACACCATCGGTGAAATGCTGGATATTCGTTTCGAAAGCTTCGACG ACGAATCCCTTACCGCCAGTATGGCGGTCGACCACCGCACCCATCAGCCCTACGGCCTGCTGCACGGCGGGGCCTCGGTGGTGCTGGCCGAAAGTGTCGG CTCCATGGCCGCCTACTTGTGCATTGATGCAAGCAAGTTCTATTGCGTGGGCCTGGAGGTCAACGCCAACCATCTGCGCGGTGTGCGCAGCGGTCGGGTG ACGGCGGTGGCCAAGGCTATTCATATCGGGCGCACTACCCAAGTGTGGGACATCCGTTTGAGCAGCGACGAGGGCAAGGCCAGTTGTGTCTCGCGCCTGA CCATGGCCGTGGTGCCGCTGGGTGAACAACCGCCGGCGCGATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGTGGCGTGAGTGTCATCATTCCTGGCAGTTACAGTCATTGCTGTAGAGGCCGGCCATGGTGACAATCCCCCTCTGTTTTTGTTGATGGAACCTGTATG TCGCAGCACGTGTTTTTTACCCACGCCAATGGCTTCCCTTCGGCCACTTACGGCAAGCTGTTTGCCGCCCTGGCCCCGGAATATGCGGTGGCACATCTGC CGCAGCACGGTCACGACCCCAGGTTCCCGGTGGATGATAACTGGCAGAACCTGGTGGACGAACTGATCCACCATCTGGAGCAGCAGCCAGAACCGGTATG GGGCGTTGGCCATTCCCTGGGAGGCGTGCTGCATTTGCACGCGGCCATGCGCTGCCCGCACCTGTACCGGGGCGTGGTGATGCTGGATTCGCCGGTGCTC ACCCGCGCAGACCGCTGGGTGATCCGCGCTGCCAAGCGCTTTGGTTTTATCGACCGCCTCACCCCGGCTGGGCGCACGCTTGGCCGGCGCGAAGAATTCA
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Amino Acid Sequence |
>esterase
MSLWRTQPNIEHLNAIQKNTIGEMLDIRFESFDDESLTASMAVDHRTHQPYGLLHGGASVVLAESVGSMAAYLCIDASKFYCVGLEVNANHLRGVRSGRV TAVAKAIHIGRTTQVWDIRLSSDEGKASCVSRLTMAVVPLGEQPPAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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