Pseudomonas sp. CFII64, CFII64_23020 (rbfA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CFII64 soap_scaffs_II64_half.Contig50, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGTCAAGAAAGCCCTCACCGGTATGCTTGGCAGCGACGTCCGGGAAAATATCCTGGGTATCGCCGAAGTGCGTGACGTGTTCCGTTCTCCGAAATTCGGC GCAATCGCCGGTTGTATGGTTCTTGAAGGTGTTGTTCACCGTAACCGTCCAATCCGTGTACTGCGTGAAGACATCGTTATCTTTGAAGGCGAGCTGGAAT CCCTGCGCCGCTTCAAGGACGACGCTGCCGAAGTTCGTGCCGGCATGGAATGCGGTATTGGCGTCAAGAGCTACAACGACGTCAAGGTCGGTGACAAGAT CGAAGTCTTCGAGAAGGTCCAAGTGGCTCGCAGCCTCTAAGTCGCGAGCTATCGGAGCCATGACAGGTCGCCGCATGCAAATGCCCCGCGTCCGGTCATG GGCTCTAAACGCAACGCCCGGTCCGACTTCCGTCAGGCCGGGCGTTTGCCGCTTTCAGACCGCAAGGGTTTAGTCCCCGGTCAGTACCAGGTAGCAAAAC
DNA Sequence for Gene
>CFII64_23020 |rbfA
ATGGCAAAAGAATATAGCCGTACCCAACGTATTGGCGATCAGATGCAGCGCGAGCTGGCCCAGCTGATCCGCCGCGAAATCAAAGACCCGCGCGTGGGTC TGGTCACCATTACGGCTGTTGATGTCAGCCGTGATGTGGGTCACGCGAAGATTTTCATGACCGTGATGGGTCAGGACAGTGCTGAAGAAATCGCCCAGAC CATCAAGGTGCTCAATTCCGCCGCAGGTTTCCTGCGCATGCAATTGGCCCGCGAAATGAAGCTGCGCAGCGTTCCCCAGTTGCACTTCCACTACGACGAA AGCGTCGTGCGTGGCGCGCACCTCTCGGCTTTGATCGAGCGCGCAGTGGCTGAAGACGGTCAGCATCCGGAAAGCGCGGCGCAGAACGCGAAGCCAGAAA GCACCGAGGAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGAGTGGCTCAGGTCAAGCGTATACGCCGGAACGTCAGCGGGATCATCCTGCTCGACAAACCACTGGGCTTCACTTCCAACGCGGCTTTGCAGAAAGTGC GCTGGTTGCTCAACGCCGAAAAGGCCGGGCACACCGGCAGTCTCGATCCTCTGGCCACGGGTGTACTGCCTTTGTGCTTTGGCGAGGCTACCAAGTTCTC GCAATACCTGCTCGATTCGGACAAGTCCTACGAGACAGTCATGCAACTGGGCAAGACGACGACGACGGCCGACGCCGAAGGCGACGTTTTACAGACCCGT CCGGTGACCGTTGGTCGTGCGGATATCGAAGCTGTTTTACCTGCTTTTCGTGGGCAAATCAGTCAGATACCGCCGATGTACTCAGCGCTCAAGCGTGATG GCCAACCCCTTTACAAACTGGCTCGGGCCGGGGAAGTAGTGGAGCGCGAGGCGCGTTCTGTTACTATTGCGCGCCTGGAATTGCTGGAAAGCGAAGGCGA
Amino Acid Sequence
>ribosome-binding factor A
MAKEYSRTQRIGDQMQRELAQLIRREIKDPRVGLVTITAVDVSRDVGHAKIFMTVMGQDSAEEIAQTIKVLNSAAGFLRMQLAREMKLRSVPQLHFHYDE SVVRGAHLSALIERAVAEDGQHPESAAQNAKPESTEE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site