Pseudomonas sp. CFII64, CFII64_22955 (carB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CFII64 soap_scaffs_II64_half.Contig50, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAGGCGATCAAGGATGTGCTGGAAACCGACATTCCGGTGTTCGGCATCTGCCTGGGTCACCAATTGCTGGCTCTGGCCTCGGGCGCGAAGACCATCAAGA TGGCCCTGGGTCACCATGGTGCGAACCACCCGGTTCAGGATCTGGATACCGGCGTGGTCATGATCACCAGCCAGAACCACGGTTTTGCGGTGGACGAAGC GACCCTGCCGGGCAACCTTCGCGCGATTCACAAATCGCTGTTCGACGGCAGCCTGCAAGGCATCGAGCGCACCGACAAGGATGCGTTCAGCTTCCAGGGT CACCCTGAAGCGAGCCCGGGTCCGACCGACGTTGCGCCACTGTTTGATCGCTTCATCGAAGCGATGGCCAAGCGACGCTGACCGGTTGCCTTGAGAATGT AACGCGCAGGTGACTGGGCAGGCCCCGAACGACACGTCGTCCGGTAAATGGCCGCCCAGCCATCGCAGAGAAGCAGACCTACGTATTCGAGTGACAACCC
DNA Sequence for Gene
>CFII64_22955 |carB
ATGCCAAAACGTACAGACATTAAAAGCATCCTGATTCTTGGCGCCGGCCCCATCGTGATCGGCCAGGCCTGTGAATTCGACTACTCCGGCGCCCAGGCCT GCAAAGCCCTGCGCGAAGAGGGTTACCGCGTCATCCTGGTGAACTCCAACCCGGCGACGATCATGACCGACCCGTCGATGGCCGACGCAACGTACATCGA GCCGATCAAGTGGCAGACCGTTGCCAAGATCATCGAAAAAGAGCGTCCGGACGCGCTGCTGCCAACCATGGGCGGCCAGACCGCACTGAACTGCGCACTG GATCTGGAGCGCGAAGGCGTTCTGGAGAAGTACAACGTTGAGATGATCGGCGCCAATGCCGACACCATCGACAAGGCTGAAGACCGTTCGCGTTTCGACA AGGCCATGAAGTCCATCGGCCTGGACTGCCCGCGTTCCGGCATCGCCCACACCATGGAAGAGTCCTACGCGGTTCTGGAAAAGCTCGGCTTCCCGTGCAT CATCCGTCCGTCGTTCACCATGGGCGGCACCGGTGGCGGCATCGCTTACAACCGTGAAGAATTCGAAGAAATCTGCACCCGTGGTCTGGACCTGTCGCCG ACTAAAGAGCTGCTGATCGACGAATCGCTGATCGGCTGGAAAGAATACGAGATGGAAGTGGTCCGCGACAAAAAGGACAACTGCATCATCGTCTGCTCCA TCGAAAACTTCGATCCGATGGGCGTCCACACCGGCGACTCCATCACTGTTGCGCCAGCCCAGACGCTGACCGACAAGGAATACCAGATCATGCGTAACGC CTCGCTGGCGGTACTGCGTGAGATCGGCGTTGAAACCGGCGGCTCCAACGTCCAGTTCGGCATCTGCCCGGACACGGGCCGTATGGTCGTGATCGAGATG AACCCGCGTGTATCGCGTTCCTCGGCACTGGCTTCGAAAGCGACCGGTTTCCCGATTGCTCGCGTCGCCGCCAAGCTGGCCATCGGTTACACCCTCGACG AACTGCAGAACGAAATCACCGGCGGCAAGACTCCGGCGTCCTTCGAGCCGTCCATCGACTATGTGGTCACCAAGCTGCCGCGCTTCGCCTTCGAGAAATT CCCGAAAGCCGATGCACGCCTGACGACCCAGATGAAGTCGGTTGGCGAAGTCATGGCCATCGGCCGGACTTTCCAGGAATCCTTGCAGAAAGCCCTGCGC GGCCTTGAAGTCGGCGTGAGCGGTCTGGATCCGAAGCTGGACCTGAGCAACCCGGAAAGCATGGGCGTGCTCAAGCGCGAGCTGACCGTGCCGGGCGCCG AGCGTATCTGGTACGTCGCGGATGCGTTCCGTGCTGGCATGACTGTCGAAGAAATCTTCGCTATGAACATGATCGATCCGTGGTTCCTGGTGCAGATCGA AGACCTGATCAAGGACGAAGAGAAGATCAAGACCCTCGGTCTGGCGACTATCGACCGCGACCTGATGTATCGCCTCAAGCGCAAAGGCTTCTCCGATGCG CGTCTGGCCAAGCTGCTGGGCGTTACCGAGAAAAACCTGCGTCGCCATCGTCACAAGCTTGAGGTGTATCCGGTCTACAAGCGCGTTGACACCTGCGCTG CCGAGTTCTCCACCGATACGGCCTACATGTATTCGACCTACGAGGAAGAGTGCGAAGCCAATCCGACGACTCGCGACAAGATCATGATCCTGGGTGGCGG TCCTAACCGCATCGGCCAGGGCATCGAGTTCGATTATTGCTGTGTGCACGCGGCACTCGCCCTGCGCGAAGACGGGTACGAGACCATCATGGTCAACTGC AACCCGGAAACCGTGTCCACCGATTACGACACCTCGGATCGCCTGTACTTCGAACCCGTAACCCTGGAAGACGTGCTGGAAATCGTCCGCGTCGAGAAGC CAAAAGGCGTGATCGTCCAGTACGGCGGGCAAACCCCGTTGAAACTGGCGCGTGCTCTTGAAGAAGCTGGCGTGCCGATCATCGGCACCAGCCCTGACGC GATCGACCGTGCAGAAGACCGTGAGCGCTTCCAGCAGATGGTCGAGCGCCTTAACCTGCGTCAGCCGCCAAACGCGACGGTGCGCAGCGAAGACGAAGCG ATTCGTGCTGCGGGCAAGATTGGTTATCCGCTGGTGGTGCGTCCTTCCTACGTGTTGGGCGGCCGGGCGATGGAAATCGTCTACGAAGAAGATGAACTCA AGCGCTACCTGCGTGATGCCGTGAAAGTGTCCAACGACAGCCCGGTGCTGCTCGACCACTTCCTGAACTGCGCCATCGAAATGGACGTCGACGCGGTCTG CGACGGCACTGACGTGGTGATTGGCGCAATCATGCAGCACATCGAGCAGGCGGGTGTTCACTCCGGCGACTCGGCATGTTCGCTGCCGCCGTACTCGCTG CCTGGGCATATCCAGGACGAGATGCGCGAACAGGTCAAGAAAATGGCCCTGGAACTGGGCGTTGTCGGCTTGATGAACGTGCAGCTGGCGTTGCAGGGTG AAGACATCTACGTGATCGAAGTGAATCCACGTGCCTCGCGTACCGTGCCGTTCGTTTCCAAGTGCATCGGTGTTTCCCTGGCGATGATCGCAGCACGCGT CATGGCCGGCAAAACCCTGAAAGAACTGAACTTCACCAAAGAAATCATCCCGAACTTCTACAGCGTGAAAGAAGCGGTATTCCCGTTCGCCAAGTTCCCG GGCGTTGACCCGATCCTTGGCCCTGAGATGAAGTCCACCGGTGAAGTGATGGGTGTCGGCGACACCTTCGGCGAGGCTTTTGCCAAGGCCCAGATGGGCG CCAGCGAAGTCCTGCCGACCGGTGGTACTGCGTTCATCAGCGTGCGTGATGACGACAAGCCATTGGTGGCCGGTGTCGCTCGCGACCTGATCAGCCTGGG CTTCCAGATCGTCGCAACGGCCGGTACCGCCAAGCTTATCGAAGCTGCGGGCCTGAAAGTCCGCCGCGTCAACAAGGTGACCGAAGGCCGTCCGCATGTG GTCGACATGATCAAGAATGACGAAGTCACGCTGATCATCAACACCACGGAAGGGCGCCAGTCGATCGCTGATTCCTACTCCATTCGCCGCAACGCCTTGC AGCACAAGATTTACTGCACCACCACCATTGCTGCAGGCGAGGCCATCTGTGAAGCGCTCAAGTTCGGTCCGGAAAAGACCGTGCGTCGCTTGCAGGATCT ACATGCAGGGTTGAAGGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCAAATATCCAATGACCGTCCAGGGCGCGAAAGCCCTGGAAGAAGAACACGCACATCTCACCAAGGTCGTTCGTCCCAAGCTCAGCTCGGACATTGGCAC TGCACGTGAACTGGGCGACCTCAAGGAAAACGCTGAATACCATGCCGCTCGCGAACAGCAGGGCATGGTCGAGGCGCGTATCCGCGATATCGAAGGCCGC ATGCAGAACGCGGTGGTTATCGACGTCACGACCATCGAGCGCACCGGCAAGGTGATTTTCGGCACGACCGTGGAAATCGCCAACGTCGAAACTGACGATC GTGTGACCTACCAGATCGTTGGCGAAGATGAAGCCGATATCAAGAAGGGCAAGATTTCAGTGGGGTCGCCCATTGCTCGTGCCCTGATCGCCAAGGAAGA AGGTGACGTCGTTGCCGTCAAGACGCCTGGCGGCGTTATCGAGTACGAGATTGTTGAAGTCAGGCACATTTGACCTGGGGCGCCCATTCGCAATGGGCGC
Amino Acid Sequence
>carbamoyl phosphate synthase large subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPSMADATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCAL DLEREGVLEKYNVEMIGANADTIDKAEDRSRFDKAMKSIGLDCPRSGIAHTMEESYAVLEKLGFPCIIRPSFTMGGTGGGIAYNREEFEEICTRGLDLSP TKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEM NPRVSRSSALASKATGFPIARVAAKLAIGYTLDELQNEITGGKTPASFEPSIDYVVTKLPRFAFEKFPKADARLTTQMKSVGEVMAIGRTFQESLQKALR GLEVGVSGLDPKLDLSNPESMGVLKRELTVPGAERIWYVADAFRAGMTVEEIFAMNMIDPWFLVQIEDLIKDEEKIKTLGLATIDRDLMYRLKRKGFSDA RLAKLLGVTEKNLRRHRHKLEVYPVYKRVDTCAAEFSTDTAYMYSTYEEECEANPTTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLARALEEAGVPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEA IRAAGKIGYPLVVRPSYVLGGRAMEIVYEEDELKRYLRDAVKVSNDSPVLLDHFLNCAIEMDVDAVCDGTDVVIGAIMQHIEQAGVHSGDSACSLPPYSL PGHIQDEMREQVKKMALELGVVGLMNVQLALQGEDIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELNFTKEIIPNFYSVKEAVFPFAKFP GVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGGTAFISVRDDDKPLVAGVARDLISLGFQIVATAGTAKLIEAAGLKVRRVNKVTEGRPHV VDMIKNDEVTLIINTTEGRQSIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRRLQDLHAGLKA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site