Pseudomonas sp. CFII64, CFII64_22610

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CFII64 soap_scaffs_II64_half.Contig50, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATGATGCAGGCGGACCTGGCCAAGGTCGGGATCAAGCTCAATCTGCGGGTGCTGGAATGGGGCGAAATGCTCAAACGCGCCAAAGGTGGCGAACATGACA TGGTGTTTGCAGGCTGGGCCGGCGACAACGGCGACCCGGATAACTTCCTGACGCCAAACCTGAGTTGCGCTGCGGCCAGTAATGGTGAAAATTACGCGCG CTGGTGTAACAAGGCGTTTGAGGAAGCGATTTCCAGGGCTCGGGAGAAGACCGATCCGGCCGAACGCGCCGCCTTGTACGAGCAAGCGCAGCAAATCGTT CGCAAGGACATGCCATGGATAAGCCTGGCGTATCCGAAACTGTTTACCGCAATGCGCAAGAACGTCGAAGGCTACCAAATCAGCCCGCTGACCAATAACA ACTTCGCCACTACCAGGGTGAAGTAGAAGAATAATCCGGCGGGCTCATAACCCGAGACCCGCCGGAACACGCCTAACCGGCCGATGAGGTACACGAGAAG
DNA Sequence for Gene
>CFII64_22610
ATGTTTAGTTTTATTGCCCGCCGAGTGGGGTTGCTGATACCCACCTTCTTCGGCATCACCTTGCTGACGTTCGCCCTGATTCGCCTGATTCCTGGCGACC CGGTCGAAGTCATGATGGGTGAACGCCGGGTCGATCCGGAAATGCACGCCCAAGCCATGGAACGTCTTGGCCTCAACAAGCCGCTTTATGCGCAATACAT CGATTACGTCGGCAAGCTCGCTCAAGGCGATCTCGGCGAATCGTTGCGTACACGGACCAGCGTCTGGACCGAGTTCACCGCACTGTTCCCGGCCACTCTG GAACTGTCGCTGGCGGCGCTGATCTTCGCGGGCATTCTCGGCTTGCTGGCCGGGGTCATCGCGGCGTTGAAACGAGGGTCCCTGTTCGACCATGGGGTGA TGGGTATCTCCCTGGCGGGATACTCGATGCCGATCTTCTGGTGGGGCCTGATCCTGATCATGTTCTTCTCGGTCACCTTGGGCTGGACCCCGGTTTCCGG GCGGATCGACCTTTTGTATGACATCCCGCCAAGAACCGGCTTCATGCTGATCGATACCCTGCTCAGCGATGAAGAAGGCGCGTTTCTCGACGCCCTGCAT CACCTGATTCTGCCGGCCATCGTGCTGGGGACCATTCCGCTGGCCGTTATTGCCCGGATGACCCGTTCCTCGATGCTTGAAGTGCTGCGTGAAGACTATG TGCGTACCGCCCGGGCCAAAGGCCTGTCGCCGGCGCGCGTGGTATTCGTGCACGGCCTGCGTAATGCGCTGATTCCGGTGCTGACCGTGTTTGGCCTGCA AGTCGGCACGTTGCTGGCCGGTGCGGTGCTGACCGAAACGATCTTCTCCTGGCCGGGTATCGGCAAGTGGCTGATCGAAGCCATCGGCGCGCGGGACTAT CCTGTCGTGCAGAACGGCATCCTGTTGATCGCCTGCCTGGTGATCCTGGTCAACTTCGTGGTGGACATCCTCTACGGCTTTGCCAACCCACGCATTCGTC ATCAGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GATCATTCCTATGACCACCACTACTCCAGCGGTAGCAGTCGATCAAAGCCTGCTCTACCCCTCGCCGTACAAAGAATTCTGGCAAGCGTTCGCCAAGAAC AAAGGCGCCGTTGCCGGCCTGATGTTCATGATCCTGATTGTGTTCTGCGCGCTGTTCGCGCCGTGGGTCGCGCCCCATGATCCAAGCGAGCAATACCGCG ACTTCCTGCTGACCCCGCCGGTCTGGCTTGAAGGCGGCCAATGGCAATTCCTGCTGGGCACCGACGAACTGGGTCGCGATCTGCTTTCGCGTCTGATCCA GGGTTCGCGCCTGTCGCTGCTGATCGGCCTGTCATCGGTTGTGATGTCGTTGATTCCGGGCATTTTCATGGGCCTGCTGGCGGGTTTCTTCCCGCGCATC CTCGGCCCGTCGATCATGCGCCTGATGGACATCATGCTCGCCCTGCCCTCGCTGCTGCTGGCTGTGGCCATCGTCGCGATCCTCGGCCCTGGCCTGATCA
Amino Acid Sequence
>dipeptide ABC transporter, permease protein
MFSFIARRVGLLIPTFFGITLLTFALIRLIPGDPVEVMMGERRVDPEMHAQAMERLGLNKPLYAQYIDYVGKLAQGDLGESLRTRTSVWTEFTALFPATL ELSLAALIFAGILGLLAGVIAALKRGSLFDHGVMGISLAGYSMPIFWWGLILIMFFSVTLGWTPVSGRIDLLYDIPPRTGFMLIDTLLSDEEGAFLDALH HLILPAIVLGTIPLAVIARMTRSSMLEVLREDYVRTARAKGLSPARVVFVHGLRNALIPVLTVFGLQVGTLLAGAVLTETIFSWPGIGKWLIEAIGARDY PVVQNGILLIACLVILVNFVVDILYGFANPRIRHQR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site