Pseudomonas sp. CFII64, CFII64_22060

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CFII64 soap_scaffs_II64_half.Contig49, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGCGTTTGAGGCCGACGTCCTGATCCTCGACGACCAGATCCAGCAGCAGATGGTGCTCGGCACAAAAATCCCCCACCGCCGGAGCCCACCATGTCGCCAG GCTGTCGGCATTGATCGCGATGCGCAGTCGCTCGGGCATGCCCTCCTCGTCGAGCGCCGGCACCTGGCTTTGCAAATCCCGTTCAAGCAGACGCACCTGC TGCACATGGTTCAGCAGTCGCCGACCGATTTCCGTCGGACGCGGCGGCGTCGCCCGGACCAGCACCGGCTGACCAACACGCGCTTCCAGCAGTTTGATGC GTTGCGAAACCGCAGACTGCGACAGGCTCAACACCTGCGCCGCCCGTTCAAAGCCCGCCTGCTCGATGACCGCAGCGAGCGCCGAGAGCAATTTATAATC AAACATCAGTTTTCCTAATGAGCGATCAGGATTATTGGTTTTCCTTATACAGGTTCAAACGCCAGAATCGCCACCTGAATCTGATTGCGGAGCGTGTTCC
DNA Sequence for Gene
>CFII64_22060
ATGTGGCAAAGCTATTTGAACGGCTTGCTGGTCGCTGCTGGCCTGATCATGGCCATCGGTACCCAGAATGCATTTGTATTGGCGCAAAGCCTGCGCCGGG AACATCACTTGCCTGTGGCCATGCTGTGTATTGTCTGCGATGCGTTGCTGGTTGCCGCCGGAGTTTTCGGGCTGGCCAATGTGCTGGCGCATAATCCCAC CGTGCTGGCCGTCGCGCGCTGGGGCGGCGTGGTGTTTCTGCTTTGCTATGGCAGCCTGGCATTGCGCCGCGCCTGCTCGCGGCAAAGCCTGCAACAAAGC GAAGTGGTCGGCCTGCGCTCAAGACGAGCCGTGTTGTTGAGTGCGCTGGCGGTAACCTTGCTCAATCCTCATGTCTATCTCGATACGGTCCTGCTTATCG GTTCTCTCGGCGCACAGCAAAGTGTTCCTGGCGCCTACGTTGTGGGCGCTGCAAGCGCTTCGTTGCTGTGGTTCAGCACCCTGGCGATCGGCGCTGCGTG GCTCGCTCCGTGGCTGGCTCGTCCGGCGACCTGGCGAGTACTCGATCTGCTGGTCGCAGTCATGATGTTCAGTGTCGCCGCGCAGCTGATCAAGACTGCG TGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCGTCAGTCATTTTATAAGGCGCACAACGCAAAGCCTCTGGAACCTCTATCCCACACAGTTGTTGCGTGGTTAAGGCGCGGACCCGGTGCTATGATCCA GACCCTGCGCCGCAAAGAGTACAAACTCCCCGGCGTATGTTCTGTCTGGCCGCCCGTGATCGGCCTTGCGCTCACCGCAACTGACCTGATTAGGAGATAA ACCATGGCTTTTGAATTGCCGCCGCTGCCCTACGCCAAAGATGCTCTGGTGCCGCACATTTCCGCAGAGACACTGGAATATCACCACGACAAGCACCACA ACACCTATGTCGTAAACCTGAACAACCTGGTGCCAGGCACCGAGTTCGAAGGCAAGACCCTGGAAGAAATCATCAAGACGTCTTCGGGTGGCATCTTCAA CAACGCCGCCCAGGTCTGGAACCACACCTTTTACTGGAACTGCCTGGCGGCTAACGCTGGCGGCGAACCTACTGGCGCACTGGCTGACGCAATCAATGCT
Amino Acid Sequence
>transporter, LysE family protein
MWQSYLNGLLVAAGLIMAIGTQNAFVLAQSLRREHHLPVAMLCIVCDALLVAAGVFGLANVLAHNPTVLAVARWGGVVFLLCYGSLALRRACSRQSLQQS EVVGLRSRRAVLLSALAVTLLNPHVYLDTVLLIGSLGAQQSVPGAYVVGAASASLLWFSTLAIGAAWLAPWLARPATWRVLDLLVAVMMFSVAAQLIKTA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site