Pseudomonas sp. CFII64, CFII64_21410
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. CFII64 soap_scaffs_II64_half.Contig48, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCGCCTCATTCACCGCCAGCCAACCGTCCACAGCCTCCTGACCCGCCTCGCGAAAAACCCGTTGCAGAAGTTTGACCTGCTCGCGGCGCAGCGCCTGTTC GAATTTTGTGCCTTCATCGGTCAATGCCAACAAACGCTTGCGTTTGTCGCTGTCTGGCGCCGCGCTTCGCACCAGGTCCATGGCAACCAGCTGACGCAAT GGCGCGTTCAGCGCTTGCTTGCTGACCCCCAGCACACTGAGCAACTCCGTCACGCTCAAGCCAGGGTAGCGCGCGATAAAAAATACGATGCGTTGATGCA CCCGGCTGCAGCCGCGCCGCTCCAGCATTTCATCCGCCTTGGCAGTGAAAGCCTGATAGCCGAAGAAAAAAGCTTCCATGGCGGCTTGCTGCGTGGCGGG ATTTTTAAGGTCAAGCATATTGACGTATCCGCTTGCGATATCGTAATTTCGGTCAACCAGTTTGACTTATTTCCATTAATTTCGGCTACCGGTGATATCC
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| DNA Sequence for Gene |
>CFII64_21410
ATGGCATTTTCCGAACGCGTTTCCCGCCTGAAAAGCTCCTTGATTCGTGAAATCCTCGCGGCAGCGCAGCGCCCGGAAGTCATGTCGTTTGCCGGTGGTC TGCCGGCCGAAGCCATGCTGCCCCGTGTGGAGTGGGCCGACATGCCGGTGGCATTGGGCCAATACGGCATGAGCGAAGGTGAGCCCGAGTTGCGCGAAGC CCTGGCCGCTGAAGCCCGCGCGATCGGCCTGCCGTGCGAGGCCAGCCAGGTATTGATCGTCAGCGGTTCGCAACAAACCCTGGATCTGGCCGCCAAGCTG TACATCGACAAAGGCACGCAAATCGTTTTGGAGGCGCCGACTTACCTGGCCGCGCTGCAGATATTCCAGCTGTTCGGTGCTGACTGCCTGACGGTGCCGT TGCAATCCGACGGCCCGGATCTGCTTGCGCTGCGCCAGCGCCTGGAGCAGCACAAGCCGGCGTTCGCCTACCTGATTCCGACGTTCCAGAACCCGTCGGC GGTGCGTTACAGCGAGGCCAGTCGCGAGGCGGTCGCGGCGCTGCTGGATGATTTTGGCGTGACGTTGATCGAAGACGAGCCTTATCGTGACCTGACCTTT GACGGTGGCAGCGCACGACCGATTGCCAGTCGCCTGAAAAAAGCCAGCTGGATTTACACCGGCACCGTGTCGAAAACCTTGCTGCCCGGTTTGCGCGTCG GTTATCTGATTGCCAGTCCTGATCTGTTCCCGCATCTGCTGCGCTTGAAGCAGTCCGCTGATCTGCACACCAATCGATTGGGCCAATGGCAGGCGCTGCA ATGGATCGGCACCGAGCACTACCGTCAGCATTTGCTGCAATTGCAGGACTTCTATCGTGGCCGTAGAGACGCATTCGACGCTGCGCTGCAAGAGCATTTC GGCGATCTGGCCGACTGGAACAGTCCGCAAGGCGGATTGTTTTTCTGGCTGACGTTGAGGCAACCGTTGGATACTCGTACCTTGCTCAATGCAGCGCTGG CAGAGGATGTTGCGTTTATGCCTGGCGAGCCGTTTTTTGCCGACCCGGATGCCAATCATGGCTATCTGCGTCTGAACTTCAGCCACATCGACCCGACGCG CCTCGGCGAAGGCCTGAAGCGACTGGCGGCGGTCGTGCGAATGGCTCAGCAGCAACAGGCGGCTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGGCAATCAGGACAAGCAGTGAAAGGAGAGCAGTGATGTACAAGGTTTATGGCGATTACAACTCGGGCAACTGTTACAAGATCAAGCTGATGCTCAGCCT GCTGGGCATCGCCTATCAATGGATTCCGGTAGACATCCTCAGCGGCGAGACGCAGACGCCGGCGTTTCTGGAAAAAAATCCCAACGGCAAGATTCCGGTT CTGGAGCTTGAAGACGGCACCTGCCTGTGGGAATCCAATGCGATCCTCAATTTCCTCGCCGACGGCAGCCATTTCCTGCCGGCCGAGCCACGCTTGCGCA CTCAGGTCTTGCAATGGCAGTTCTTTGAGCAATACAGCCACGAGCCCTGTATTGCGGTTGCGCGCTTTATTCAGTTCTATCTGGGCATGCCCGAGGAACG GCTCGCTGAATACCGCTCCTTGCAAAAGGCCGGTTATCGCGCCCTGGCGGTGATGGAACAACAGCTCAAACGCACGCCATATCTGGTGGGCGAGATGTTC
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| Amino Acid Sequence |
>aminotransferase, class I and II
MAFSERVSRLKSSLIREILAAAQRPEVMSFAGGLPAEAMLPRVEWADMPVALGQYGMSEGEPELREALAAEARAIGLPCEASQVLIVSGSQQTLDLAAKL YIDKGTQIVLEAPTYLAALQIFQLFGADCLTVPLQSDGPDLLALRQRLEQHKPAFAYLIPTFQNPSAVRYSEASREAVAALLDDFGVTLIEDEPYRDLTF DGGSARPIASRLKKASWIYTGTVSKTLLPGLRVGYLIASPDLFPHLLRLKQSADLHTNRLGQWQALQWIGTEHYRQHLLQLQDFYRGRRDAFDAALQEHF GDLADWNSPQGGLFFWLTLRQPLDTRTLLNAALAEDVAFMPGEPFFADPDANHGYLRLNFSHIDPTRLGEGLKRLAAVVRMAQQQQAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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