Pseudomonas sp. CFII64, CFII64_21130

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CFII64 soap_scaffs_II64_half.Contig47, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGGCGTTCTACGGCATGTCGACCTTTGAAGGCCCAATGATGGCCATCAAGACCGTCAACTCGTTGTCCCACTACACCGACTGGACCATCGGTCACGTTC ACGCCGGTGCCTTGGGCTGGGTGGCGATGATTTCCATCGGCGCGCTGTACCACATGATCCCGAAAGTCTTCGGTCGGCCGCAGATGCACAGCATCGGTCT GATCAACGCGCACTTCTGGCTCGCCACCATCGGCACGGTGTTGTACATCGCGTCGATGTGGGTCAACGGCATTACCCAGGGCTTGATGTGGCGTGCGATC AACGACGACGGCACCTTGACCTACTCGTTCGTAGAAGCCTTGCAAGCCAGCCATCCGGGTTTCATCGTCCGGGCAGTGGGCGGTACATTCTTCGCCAGCG GCATGCTGTTCATGGCTTACAACGTATGGCGAACCGTCCGTGCTTCCGACCCGGTTGAAGCAGACGCCGCCGCCCAGATCGCTGTCGTTGGAGCTCACTG
DNA Sequence for Gene
>CFII64_21130
ATGAAGCATGAAGTCGTCGAGAAGAATATTGGCCTGCTGGCTTTCTTCATGGTTATCGCCGTCAGCATTGGCGGCCTGACCCAGATCGTGCCGCTGTTTT TCCAGGATGTAACCAACAAGCCGGTCGAGGGCATGAAGCCGCGTACCGCGCTGGAAGTCGAAGGTCGCGATGTGTATATCGCCAACGGCTGTGTCGGCTG CCACTCGCAGATGATTCGTCCGTTTCGCGCCGAGACCGAACGCTACGGTCACTACTCGGTTGCCGGGGAAAGCGTCTGGGATCACCCGTTCCTGTGGGGT TCCAAACGCACCGGCCCGGACCTGGCGCGAGTTGGCGGGCGTTACTCTGATGACTGGCACCGCGCGCACTTGTACAACCCGCGCAACGTTGTGCCTGAGT CGAAAATGCCTGCCTATCCGTTCCTGGTCGAGAAAAAACTCGACGGCAAGGACACCGCGAAAAAACTCGAAGTCTTGCGCACCCTCGGCACGCCTTACAC CGACGAAGATATCGCCGGCGCCCAGGCAGCGGTGAAAGGCAAGACCGAAATGGACGCACTGGTGGCCTACCTGCAAGGCCTTGGCACCATTATCAAAAGC AAAAGGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCTTGATGGATATCGGGATGATTCGAGGCCTTGGCACCTTGGTGGTGATGGTGGCCTTTATCGGTCTGGCGCTCTGGGTGTTCAGCCCTCGGCGCAAGTC AGAGTTTGAAGACGCGACCTTGCTGCCCTTCGCGGATGATCCCGAAGCCATCAAGAACGTCGAGCAAGCGCAAGCTTCCAGGAGCAACAAATGAGTACGT TTTGGAGTCTGTACGTCACAGTCCTCACCCTGGGTACGATCTTCGTCCTGACCTGGCTGTTGCTGTCGACCCGCAAGGGCCAGCGCAGCGAGGCCACGGA AGAAACCGTTGGTCATTCCTTCGATGGCATCGAGGAGTACGACAACCCGCTGCCCAAATGGTGGTTCATGCTGTTCGTGGCCACCATCATCTTTGCCCTG GGTTATCTGGTTCTGTATCCGGGGCTGGGCAACTGGAAAGGCATATTGCCGGGTTACGACTACCTGGATAACGACAAGAAGACCGAGTTCTCCAATGGCC
Amino Acid Sequence
>cbb3-type cytochrome c oxidase subunit II
MKHEVVEKNIGLLAFFMVIAVSIGGLTQIVPLFFQDVTNKPVEGMKPRTALEVEGRDVYIANGCVGCHSQMIRPFRAETERYGHYSVAGESVWDHPFLWG SKRTGPDLARVGGRYSDDWHRAHLYNPRNVVPESKMPAYPFLVEKKLDGKDTAKKLEVLRTLGTPYTDEDIAGAQAAVKGKTEMDALVAYLQGLGTIIKS KR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site