Pseudomonas sp. CFII64, CFII64_19293

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CFII64 soap_scaffs_II64_half.Contig45, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTCTCGGTGCGCAGTGAAAACGGCGCTGCACGCGTTGCGGTGTTCGAGCATCAGGTCCGCATTACTCCGCTCGCGGGCTTACCGCTGGTAGTGGATGCCG GGATGCAGTGCGCGTTCGATAGTCGCCAGACACAAATCCCCTCCCCCGTGACGCCCGGCCAGGATAGCTGGAGCAAGGGCGTGCTGGTCGCCAACGAGCA ACGCCTCGACAGTTTTCTCGCGGAACTGGGCCGCTACCGCTCCGGCTGGCTGCGCTGTGATCCCGCCATTGCCGGCCTGCGCATCAGCGGTGCCTTTGCC TTGAACGACACTGATCAGGCCTTGCAGGCGCTGACCACCAGCTTGCCGGTGCGTGTAGAAGCAAAGACCCGCTATTGGGTAACCGTATTGCCGCGTTAAA AAAATTCACTGTTGATGATAGGTTTTCTCATTCTCGTTCGACTCATAGAGCAGAAGGGTAAACAGCCCGCCTGCCAATCAAGACGACGAGACATGCAAAG
DNA Sequence for Gene
>CFII64_19293
ATGAAAATACCCTTCAAGACCGGCCGCCTCACGACGAGTCTGCGCGGCGCCCTGCTGTGTTCTACGTTGCTGGGAATCGGCGCTTCGTTGCCGGCTTACG CCGCCGAAGGCAGCGTGCGCGAGTACCACATCAGCGCCGGCGATCTGGGCACGGCCCTGACCCGCTTTGCAGCCGAGGCCGGTGTGGTCTTGTCGTTTGA CCCGGCGCTCACGCGAGGGCTCAGTTCGACAGGGCTGGACGGGAAATTCGCCATGACTGATGGGCTTGAGCGTTTGCTGGCTGGTTCAGGCTTGCGGGCG ATTCAGGAGAGCGACGGGCGCTATTCCCTGAGCCCCGGAAGTTCCCAGACCTCGGCAATAGAATTGGGCCGCACGGAGATCGTCTCCAATGAACTGGGGA CCATCACCGAGGGCTCTGGGTCCTATACGCCGGGCACCATCGCCACCTCGACGCGCCTGGTCCTGTCCCCGCGCGAGACACCGCAATCGATCACCGTCGT CACGCGTCAGCACATGAATGACTTCGGCCTGAATAACGTCGACGATGTGATGCGCCATACGCCGGGCATCACCGTGTCGGCGTTCGACACCGAGCGCAGC AACTACTATGCCCGCGGGTTTTCCATCAATAATTTCCAGTACGACGGTATTCCCTCCACGTCCCGCAACGTCGGCTATTCCGCAGGTAACACTCTGAGCG ACATGGCCATCTACGACCGGGTCGAGGTGCTCAAGGGCGCGACCGGGCTGTTGACGGGCGCCGGATCGCTGGGCGCCACCATCAACCTGGTGCGCAAAAA GCCCACCGCCGACTTTCAGGGGCATGCCAGCCTGGGTGTCGGTTCCTGGGACAACTATCGCAGTGAGCTGGACGTGAGTGGCCCGCTGACCGAAACCGGC AATGTGCGTGGCCGCGCCGTTGCCGCTTATCAGGACAAAAACTCGTTCATGGACCGCTATTCGCGCAAGAGTCCGGTGTACTACGGGATCATGGAATTCG ATCTGTCACCGGACACCATGCTCACAGTCGGCGGCGACTACCAGGACAGCCTGCCCAAGGCGTCCACATGGTCGGGGAGTTTCCCGCTGATCGATGCCAA CGGTGATCGCAATCACATCTCGCGCTCGTTCAACAACGGCGCCGACTGGAGCAGCTGGGAGCAATACACGCGCACCGTATTCGCCATGCTCGAGCACAAC TTCGATAACGGTTGGGTCGGCAAGCTGCAGCTGGATCACAAGATCAATGGCTACCACGCGCTCGTGGGCTCCATTCAGGGCAGCACGCCAAATGCCGATG GCACCTCATCCATCACAGCCGGCAAATACACCGGTGAAACCGTCAGCGACTCAGCCGACCTGTACGTCACCGGACCCTTCAGCCTGCTGGGGCGTGAACA TGAACTGGTGGTGGGCGGCTCCATTGCCACGTCTACCTGGAAAGGCAAAGGCTACTGGGATTACACCACCTACGGCCCGAATGTCGTCGATTTCAACAAT TGGCACGGCAACTTCCGCGAACCTGATTGGGGCTCGCAGACGCAGTGGATCGACGATACCGTGCGCCAGACAGGTGCCTACGTCACCACACGCCTGAACA TCACCGACGACTTGAAGGTGTTGCTCGGCGGGCGCGTCGTTAACTACCAGCTGACTGGCATCACCCCGTCCTACAAGGAAACCGGGCGCTTTGTGCCTTA CGCTGGCGCGGTCTATGACCTGAACGACACCTATTCGGTGTACGCCAGCTACACGGACATTTTCATGCCGCAGGAAAACTACAACCGCGACCGCGATAAC AAGATCCTTGATCCGGACGAAGGCCAGAACTATGAACTTGGCATCAAGGCCGAGTTCTTCGACAAACGCTTGAACGCCAGCGCTGCCTACTTCGAAATTC ATGAAGACAATCGTTCGGTGTCCGATGACGAGTACAACAATCGCCAGCCGACCCCTGACAACTATGCGTTCAAAGGTACCCAAGCCGTCACCAAGGGTTA TGAAATCGAGATGTCCGGCGAGCTGGCGCCTGGCTGGCAGCTGCAGGCCGGCTACACGCACAAGATCGTGCGTGACGACAACGACATAAAAATCTCCACC TTCGAGCCCGAAGATCAAATCAGCCTGTATACCTCCTACAAGCTCAAAGGCAATCTTGACCGGCTCACCCTCGGCGGCGGCACCCGCTGGCAGAGCGTTG CGTGGCAGGATATCTACAACTCCCCGCATGGCGGCTACGAGGAGTTTTCCCAGAAAGCCTACTGGCTGGTGGACGCCATGGCCCGTTATCAGTTCAGCGA AAATCTCTCGACGACGCTGAACGCCAATAACATCTTTGACAAGTCCTACTACACCAACATCGGCTTCTACAATTCTGCGGCATACGGCGAGCCGCGCAAC TTCATGCTCACTACTCGTTGGGATTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACCCCATCGCAGACGCACGATGACGCCTTGTCAGCTCATCGTGCAACCGGCATAGCCGTGCGGGATACAAGCAATGCCAGCACGGCTGCTACCAGGAGAA ATACCCCGCTGGCGATGAACGTCGCCTGGTAGCCAACGCCGTCATACAGCAACCCGCCCACCGTTGCGCCGAGGGTAATTGCCAGCTGAATCACCGCCAC CATCAACCCGCCGCCGGCCTCCGCATCCCGTGGCAGTATTCGTGACAGCCAGGTAAACCAACCCACCGGCGCACACGTCGCGATCAAGCCCCACGCCCCG AGCAGGACCGCTGTCAGCCACATTGAGCTGCCATAACCCAGCAGAGCGATGGCAATTACCGCCATCAAAAACGGGATGATCATCAGCACTCGGTAAAGAC TTCGGTTCAACACCGAGCCAATCACCATCGTCCCAACTAATCCGGCCATGCCGATAATCAGCAACAACAGGGATAGCCCGGAAACATCGACGCGGGTGAC
Amino Acid Sequence
>TonB-dependent siderophore receptor
MKIPFKTGRLTTSLRGALLCSTLLGIGASLPAYAAEGSVREYHISAGDLGTALTRFAAEAGVVLSFDPALTRGLSSTGLDGKFAMTDGLERLLAGSGLRA IQESDGRYSLSPGSSQTSAIELGRTEIVSNELGTITEGSGSYTPGTIATSTRLVLSPRETPQSITVVTRQHMNDFGLNNVDDVMRHTPGITVSAFDTERS NYYARGFSINNFQYDGIPSTSRNVGYSAGNTLSDMAIYDRVEVLKGATGLLTGAGSLGATINLVRKKPTADFQGHASLGVGSWDNYRSELDVSGPLTETG NVRGRAVAAYQDKNSFMDRYSRKSPVYYGIMEFDLSPDTMLTVGGDYQDSLPKASTWSGSFPLIDANGDRNHISRSFNNGADWSSWEQYTRTVFAMLEHN FDNGWVGKLQLDHKINGYHALVGSIQGSTPNADGTSSITAGKYTGETVSDSADLYVTGPFSLLGREHELVVGGSIATSTWKGKGYWDYTTYGPNVVDFNN WHGNFREPDWGSQTQWIDDTVRQTGAYVTTRLNITDDLKVLLGGRVVNYQLTGITPSYKETGRFVPYAGAVYDLNDTYSVYASYTDIFMPQENYNRDRDN KILDPDEGQNYELGIKAEFFDKRLNASAAYFEIHEDNRSVSDDEYNNRQPTPDNYAFKGTQAVTKGYEIEMSGELAPGWQLQAGYTHKIVRDDNDIKIST FEPEDQISLYTSYKLKGNLDRLTLGGGTRWQSVAWQDIYNSPHGGYEEFSQKAYWLVDAMARYQFSENLSTTLNANNIFDKSYYTNIGFYNSAAYGEPRN FMLTTRWDF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site