Pseudomonas sp. CFII64, CFII64_18773

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CFII64 soap_scaffs_II64_half.Contig45, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTCAGCGAACAGAGCTCCGGCCTGGCAATCAGCGGATAAGCGAGCCGCTGAGCCAGCGTCATGCGCGTGCTGCCGCCGGTAGTGATATTGATGATTGCAT CCGTCTCCTGGGCGATTACCGGGACGAACTGCCTGAAAACTTCCGGGTCCGGAGTCGGCCGGCCATCGTGAGGATCGCGTGCGTGCAGATGCAGGATGGC GGCCCCCGCTTGCGCCGCTTCAATGGACTGTTGCGCAATGTCTACGGGTGTCAGTGGAAGGTACTCGGACATTGACGGCGTGTGAGTCGCACCCGTGATC GCACAGGAAATGATGATTTTTCGGCTCGGCAGACTCATTGGGATGACCTGTATTGTTATTGGACTTGGCAAGCGCGGTGCGAAATCGACTGAGGGTGCAG GCGCTTCTTGTGCCATCAAGCTTATTGAAGTTTCAAAACAACGGTAAGATCATTAACGGACAGTAAAGAATCTCTAAGGGACATCGAAAGGAGTCATCCG
DNA Sequence for Gene
>CFII64_18773
ATGGCACCAAAAATCCCGCTTTTCAATGAGCGTATCTATGCCCCTTACAAGATTGCGGCGCTGGTTGAAGTTCTCGGCGAACAGGGCATTGCAGCGGCCG ACAGCTTGCGCGGCAGCGGCGTACAAGAGCATCAGATCTACGACGCGACGGTGCTGACCTCGGTTCGGCAATACGCTGCCGTGTGCGGCAACGCAGTGGC GCTTTCGCAGGATCCCGCCACGCCGTTCAAAACCGGTGCCCGCCTGCACTTGTCCGCCTACGGGATGTATGGCTACGCGCTGATGTCCTGCCTGTCACTG CGCGACTACTTCAGGCTCGGCGTTAAGTACCATTCATTGGCGACGCCAACCTTGACCATCGAATGGCACGAACATGAGGATGAGGCTGTATGGACGTTCC CGGATGCCTCCAACCCAAGCCCGTCCAGGGAAATCAAACAGTTCTGGATCGAGCAGCAGTTTACCCAGCACGTCACCCATCTTCAGGACGTTTTTGGAAG GAGTTGCCCGCCGACCAAGGCCTGCTTCTCTTACCCTGCCCCGGCGCACGCGCAAATCTATTCGCTCTATCTGGGCTGCCCGTGCATTTTTGATCACGAC CAATGCGAACTGCATTACGACAGTTCGATCCTTGAGCAAAAACCCCATCTGGCCCATCGCCTGACAGCGACGTTGCTGCAAGAGACCTGTGATCGATTGA TCGGGCAGGCGAAGGTATCGTCGGGGATTTCGGGCGAGGTGTATCAGATCATGATGCAGACCCCGGGTGAGTTTCCGAGTATGGAGATGACCGCCGAACG GCTGCACATGACCACCCGCAGCCTGCGCCGAAAACTGTTGGAGGAAGACACATCGTTCGTGGCAATCACCGATGACGTACGCTGCTCGCTGGCTATCGAA TACCTTCGAACAACGATCATGAGCACCGACGATATCGCGCATCTGCTGGGCTTCTCCGAACCGACCAATTTCCGCCGTGCATTCAAACGCTGGACAGGTA AAACCACCAGGGACTATCGCCAGGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AAATCATGCACTGAGCACAATGCTCAGCACTTTTTGACAGATGTAGGGCTCAAACCCGCCGATGTTAAAAATAAAACCCTGAAAACCGACGTATCGCAGG CTGTCTCCAGGCGTTTCGCCAGACCATAATGGCCTCACAACGATAAACGGGGCTCACCCGGAGGCATGCAAGCGATGTACAGAGACCATATCGTCAAGGC TCGTTTCACTGACAGCGTCGTGGTCATGGGCGTGATCGCCGTTCTCATTTTCAGTCTCACGTTGATCTGCGGCGTGGGCGAAGGCCGCCTTTCGGCCCTG ATGGGGCCTATCGTTCTTGATCTGGAATCGCCTCTGGCGCGCAACATCGCGGTGGGCGGTACATTCACCCTCACGGCCATGCTGAACTTATTCATGCTGG GCCGTTTCCCGCTACGGGCGCAGATCATCACGGTCTGGTGCGAATTGCTTGTGCTGTTCCTGCTGTTCTTCGACACATTCAATCTGTCCTACAGCTTCAT
Amino Acid Sequence
>transcriptional regulator, AraC family protein
MAPKIPLFNERIYAPYKIAALVEVLGEQGIAAADSLRGSGVQEHQIYDATVLTSVRQYAAVCGNAVALSQDPATPFKTGARLHLSAYGMYGYALMSCLSL RDYFRLGVKYHSLATPTLTIEWHEHEDEAVWTFPDASNPSPSREIKQFWIEQQFTQHVTHLQDVFGRSCPPTKACFSYPAPAHAQIYSLYLGCPCIFDHD QCELHYDSSILEQKPHLAHRLTATLLQETCDRLIGQAKVSSGISGEVYQIMMQTPGEFPSMEMTAERLHMTTRSLRRKLLEEDTSFVAITDDVRCSLAIE YLRTTIMSTDDIAHLLGFSEPTNFRRAFKRWTGKTTRDYRQG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site