Pseudomonas sp. CFII64, CFII64_17136 (rpmH)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Cellular Component | GO:0005840 | ribosome |
Inferred from Sequence Model
Term mapped from: InterPro:MF_00391
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0006412 | translation |
Inferred from Sequence Model
Term mapped from: InterPro:MF_00391
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0003735 | structural constituent of ribosome |
Inferred from Sequence Model
Term mapped from: InterPro:MF_00391
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| FunFam | G3DSA:1.10.287.3980:FF:000001 | Mitochondrial ribosomal protein L34 | - | - | 1 | 44 | 1.3E-22 |
| NCBIfam | TIGR01030 | JCVI: 50S ribosomal protein L34 | IPR000271 | Large ribosomal subunit protein bL34 | 1 | 44 | 1.1E-25 |
| Gene3D | G3DSA:1.10.287.3980 | - | - | - | 1 | 44 | 7.9E-24 |
| Pfam | PF00468 | Ribosomal protein L34 | IPR000271 | Large ribosomal subunit protein bL34 | 1 | 44 | 6.3E-25 |
| PANTHER | PTHR14503 | MITOCHONDRIAL RIBOSOMAL PROTEIN 34 FAMILY MEMBER | IPR000271 | Large ribosomal subunit protein bL34 | 1 | 43 | 2.2E-17 |
| Hamap | MF_00391 | 50S ribosomal protein L34 [rpmH]. | IPR000271 | Large ribosomal subunit protein bL34 | 1 | 44 | 16.245291 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.