Pseudomonas sp. CFII64, CFII64_17106
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. CFII64 soap_scaffs_II64_half.Contig39, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AAGCGATTGCACAACTGAGCAAGGCCGGCTGGACGGTGGCAGTCGCCACTAACCAGTCCGGCATCGCCCGGGGCTATTACGACATTGCCACCCTCGATGC CATGCATGCGCGCTTGCGTGAACTCGTGACCGGGCAGGGCGGCGAAGTCGGTTTGATCGTTTATTGCCCACATGGCCCGGACGAAGGCTGCGCTTGCCGC AAGCCCAAGCCGGGCATGTTGCAGACCATCGCAAATCACTACGCTGTGGATCTGGCGGGTATATGGTTTGTAGGTGACAGCAGCGGTGACCTGCAGGCCG CGCTGGCCGTCGACTCTCAACCGGTTCTGGTCAAGACCGGCAAGGGCAGCAAGACGCTGGCTGGAACGCTGCCCACGGGTACTTTGGTTTTTGACGATCT GGCGGCAGTTGCCGCAGAACTTATCCACAAGAGCGCTCCGCAGAACCAATAGCGGTCCGCTTCATTGAGCGGGCATTAGTCCCGTACGGTAAAAGTAGCT
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| DNA Sequence for Gene |
>CFII64_17106
ATGTCGATCATGCAGGCAATCAGAACCTTTGTCTTTTACCTGCTGCTGGGCACCAGTTCGCTGCTGTGGTGCACCTTGAGTTTCTTTATCGCGCCGTTCC TGCCGTTTCGCGCACGCTATCGTTTCATCAATGTGTACTGGTGCCGCTGCGCATTGTGGCTCACGCGGGTATTTCTCAACATTCGCGTCGAATTGATCGG CCAGGAAAATGTCCCGGCAACGCCCTGCGTGATCATTTCCAACCACCAGAGCACGTGGGAAACATTCTTCCTGTCCGCGCATTTCGAGCCTCTGAGCCAG GTGCTCAAGCGTGAATTGCTCTACGTACCGTTCTTTGGCTGGGCCATGGCCATGCTGCGACCTATCGCCATTGATCGCGAGAACCCCAAGGCCGCGCTGA AGGAAATCGCCAAGAAGGGTCATGAGCTGCTCAAGGATGGCGTCTGGGTATTGATCTTCCCCGAAGGCACACGCGTGCCGTTTGGTCAGGTCGGCAAGTT TTCCCGAGGCGGCACTGCCTTGGCGGTCAACGCTGATCTGCCGGTGCTGCCGATTGCGCATAACGCTGGCAGGTATTGGCCGAAAGAAGGCTGGGCGAAA AAGCCCGGCACGATCCAGGTTGTGATCGGCGCACCCATGTACGCCGAGGGCACAGGACCGCGCGCCATTGCTGCGTTGAATGACCGCGTGCAGGCCTGGA ACGAAGCGACGCAGGTGGCCATGGGCTCGGTGGCTGCACCGACGACGAGCACCGAAAAAGCGGCGGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTTTGTGGATAACCTGTGCACCGTTTTCGCAAAAACTGCAAAAAACCCTGCCAACCCCTTAATTTTACTGCTTATTTCGATTACTCATTAATGAGCCAAA AACGTGCATAAGTTTTTCTGAACAGAAAAAACCGACTTCATTGAAGTCGGTTTTTTTATGGCTGTTGATTCAGTTTCAGAGTGCTGATTTGCCGCTATTT TTTCGGCTGCAAAAGCAGCGCAACCAACGCGCTCCAGCCCGTCTGATGGGACGCTCCCAAGCCGCGTCCAGTTTCGCCATGGAAGTATTCGTGGAACAAC AGCAAGTCGCGGCTCTGCGGATCGGCTTGCAGTTGTGGATAACCCGCCATCGAAGGCCGACTGCCGTTTTCATCCTTGAGAAACAAGCGAGTCAGACGCG CGCTGAGTTCATCGGCCACTTCATCGAGCGATGCCAGATAGCCTGAATGGGTCGGAAACTCGATGGAGAAGTTCTCGTCGTAATAGCGATGAAATTCCCG
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| Amino Acid Sequence |
>phospholipid/glycerol acyltransferase
MSIMQAIRTFVFYLLLGTSSLLWCTLSFFIAPFLPFRARYRFINVYWCRCALWLTRVFLNIRVELIGQENVPATPCVIISNHQSTWETFFLSAHFEPLSQ VLKRELLYVPFFGWAMAMLRPIAIDRENPKAALKEIAKKGHELLKDGVWVLIFPEGTRVPFGQVGKFSRGGTALAVNADLPVLPIAHNAGRYWPKEGWAK KPGTIQVVIGAPMYAEGTGPRAIAALNDRVQAWNEATQVAMGSVAAPTTSTEKAAV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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