Pseudomonas sp. CFII64, CFII64_16032

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50341
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50341
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF47226
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004673 protein histidine kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1228 1359 2.6E-28
SMART SM01231 H_kinase_dim_2 IPR004105 Histidine kinase CheA-like, homodimeric domain 1393 1532 3.1E-9
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1702 1715 1.1E-10
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1235 1348 1.96E-26
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1534 1715 4.32E-35
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 432 556 1.0E-12
FunFam G3DSA:3.30.565.10:FF:000016 Chemotaxis protein CheA, putative - - 1533 1717 1.3E-58
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 1718 1850 2.22E-24
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1092 1190 2.90572E-15
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 1791 1852 6.1E-20
SMART SM00260 chew_2 IPR002545 CheW-like domain 1710 1854 1.1E-27
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1235 1332 9.7E-8
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1094 1194 3.0E-15
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 10 99 4.5E-8
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 779 902 2.22E-20
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 627 733 2.4E-7
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1092 1216 2.3E-29
Gene3D G3DSA:3.40.50.2300 - - - 1885 2004 2.5E-41
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 779 875 1.4E-4
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1678 1696 1.1E-10
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1883 1996 4.3E-36
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 627 758 9.29E-24
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 7 130 2.75E-20
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 629 727 1.9E-13
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1235 1333 3.29325E-12
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1531 1716 4.8E-51
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 1577 1718 1.5E-22
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 780 911 1.2E-18
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 1723 1855 2.2E-23
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 627 764 4.9E-25
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 781 880 8.3E-13
PANTHER PTHR43395 SENSOR HISTIDINE KINASE CHEA - - 639 759 0.0
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 627 725 3.5382E-9
Coils Coil Coil - - 1424 1451 -
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1092 1206 2.36E-28
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1622 1636 1.1E-10
Coils Coil Coil - - 787 807 -
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1882 2000 7.83E-37
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 779 868 5.03345E-10
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 921 1041 6.47E-14
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 14 129 1.3E-9
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1092 1189 1.3E-7
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 1581 1716 2.3E-14
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 1885 1996 1.46091E-32
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 920 1047 1.6E-12
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1237 1337 1.8E-13
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 1885 1996 4.5E-28

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.