Strain | Pseudomonas sp. CFII64 soap_scaffs_II64_half.Contig28, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATGCCCGCCACGTCTTCACCCATTTCGATGATGAAGACGCGGCGCAAAAACTGGATCTGTCCGCCGTACTGGGCGCTCCGGCCACTGGTGTGCATGTGTA TGTCTGCGGTCCGGCAGGCTTCATGGACTGGGTCATCGCCGAGGCCTTGAAGGCTGGGTATGCCGACGATCATGTACACCGCGAATACTTCCAGGTGGAA GTCGATGGGTCCGGTGCCGGTTTCGAAGTGGTCGCCGAGCGCAGCGGCAAGACCGTTCAGGTCGCCGAAGGCCAGAGCATCGTCGATGCCTTGTCAGCCG TGGGCATCAAAATCGAAATTTCCTGTGAGCAGGGCGTCTGCGGCACTTGTCTGTGCGACGTACTGGAAGGCGAGCCCGATCACCGCGACGTTTACCTCAC CGACGATGAAAAGGCCGCCAACGACCAGATCCTGGTGTGTTGCTCGCGGGCCAAATCAAAAAAGCTGGTTTTGGATATCTGATCCAACGGAGGCAACACC
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DNA Sequence for Gene |
>CFII64_13138
ATGGTCGATTTGACTGGATTTCGTAACGCGATGGCGCTGTTGGGCGGCGCCGTTTCGGTCATTACCACGGACGGCCCTGCAGGCCGTTTCGGGTTCACCG CTTCGGCGGTCTGCAGCGTCACCGATTCGCCGCCCACCTTGCTGGTGTGCATGAATCGTTCGTCACATTCCAATGTGCATTTCAAAACCAACGGCGTGCT CAGCGTCAATGTGCTGACTGCCGAGCACCAAGATATTTCCGGGGTGTTCGCCAACCGGGAGATGGACGCCGAACAACGTTTCGCCAGCGCCCAATGGCAC ACCATGGAAAGCGGTGCGCCGATGCTGGACCAGGCATTGGTCAGTTTCGATTGCCGGATTGCCCAGGCCCATGAAGTGGGTTCACACACGATTTTCTACT GTGAAATTCTCGACCTGTGCATGGGTGCTTCTCAAGAAGGGTTGGTGTATTTCAATCGCGCCTATCACCGTTTGAGTGAAGCCTCCTCGGCGCAGAAGGC CTACAAGGCTGTCGCCTCATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGCCTGAGGCCGACTTGCGCTGCGGCGCTGATCTGCAAAAACTCCTTTGGTCAGGCCTACTCAGCCTGGCTTTTTTTATCCAGTGTTAAGCAAGGTGCGA GCGCCTTGTTAATGCTGTGAGCCAGGCCCGGGCATTAAATGAAACTCTATGAATTGATCACCTTCACCTTACGTGTCCGTACACCCGCATCCGCACTGGA CATCCTCGAAGGCACCCTGGCGCTACCTGGCGTGGGCGGCACATTGATGGGCTGCTGGGTATCGGAGATTGGCCCGTTGAATCAAGTATTGGTGTTTCGT GGTTTCAGCGATGAGTTCGCGAGGCAGAACGAGCGTGAGCGTTATTTGCTGGCGGCTGACGCCTTCGGAATCGAAGCATTGATGCTCGACATGACCGTCG AAATTACACGATATTTCCCTTTATCAAACCCTTGAAGCCAGGAAAGTACGGGCCATTCTACGAGTTGCGTCAATACAACCTGATCCCCTCGGGGCTGACA
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Amino Acid Sequence |
>flavin reductase domain-containing protein
MVDLTGFRNAMALLGGAVSVITTDGPAGRFGFTASAVCSVTDSPPTLLVCMNRSSHSNVHFKTNGVLSVNVLTAEHQDISGVFANREMDAEQRFASAQWH TMESGAPMLDQALVSFDCRIAQAHEVGSHTIFYCEILDLCMGASQEGLVYFNRAYHRLSEASSAQKAYKAVAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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