Pseudomonas sp. CFII64, CFII64_11424 (dnaG)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. CFII64 soap_scaffs_II64_half.Contig25, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AAGCCGGGCTAGCGGCAGTTAAAGCACAGCATAACGCTACATTGACTGAGGCTGTTTGAGTCGCCCACGCGACCACATCCGGCACAAACACTCCGTCAAA GCACGTCCAGCCTGAACTCAGGCCACTTTGATTTCGTCGATACCGACGAGAGCAAATCAGGGTGCATGACGAGTATGCCTTGATGACCTTCGCAAGAAGT TCAGCCAAGGCAGCGTCCTTCTCGACCGCTGAGCGAAAACCGAGGCAGCAGGCCGAAGTCCAACTCGCAGCCCTCAGCTCGCAGCAGCAGCCGAACCCAA AAATACCAAGCCCTGACTACCTGATCTAGACAGATACCTACAGGTGGATTTGCTGGCAGCTACTCTTCCGGATAATGATGAGTCGGCACTGGTGCTCAAT GGCGCATGTCTTTCAGCCATGATCTGCCAACCAGCCAACCGTCGCTGTATTCTGGATTCGCCACGATGTTCGCGGCGAAACGCTTGATGATGAGAATTCC
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| DNA Sequence for Gene |
>CFII64_11424
|dnaG
ATGGCCGGGCTTATTCCTCAGAGCTTCATTGACGACCTTCTGAACCGTACCGACATTGTCGATATTGTCAGCTCACGTCTGCAATTGAAGAAAACCGGGA AGAACTACAGCGCCTGTTGCCCGTTCCACAAGGAAAAGACACCGTCGTTCAGCGTCAGCCCCGACAAGCAGTTCTATTACTGCTTCGGTTGCGGCGCGGG CGGCAATGCCCTCGGCTTCATCATGGATCACGACAACCTGGATTTCCCTCAGGCCGTCGAAGACCTTGCCAAAGCCGCGGGCATGGAAGTACCCCGCGAG CAGAGCGTCAAAGGCCAGAAACCCCGCCAACCGACCGACTCGCCGCTGTACCCGTTGCTGACCGCCGCAGCGGAATTTTACCGACAGGCACTCAAGAGTC ATCCGACCCGCAAATCTGCGGTGGATTACCTGAAAGGCCGTGGCCTGTCTGGGGAAATCGCTCGGGACTTCAGCCTCGGCTTTGCCCCGCCCGGCTGGGA CAACCTGCACAAGCATCTGGGCAGCGACACGCTCCAGCAAAAAGCCATGATCGATGCCGGCCTGCTGATTGAAAACGCGGAAACCGGCAAACGTTACGAC CGGTTTCGTGATCGTGTGATGTTTCCGATCCGCGACAGTCGCGGGCGAGTGATTGCCTTTGGTGGTCGGGTATTGGGCGATGACAAGCCCAAGTACCTGA ACTCACCGGAAACTCCGGTGTTTCACAAAGGCCAGGAACTGTACGGTCTGTTCGAAGCGCGCAAGCACAATCGCAGCCTCGACGAAATCATCGTGGTCGA AGGCTACATGGACGTCATTGCGCTGGCCCAGCAGGGCTTGCGCAATGCCGTCGCCACGCTGGGTACTGCCACCAGCGAAGAGCATTTGAAGCGCCTGTTT CGGGTCGTGCCGAACGTGCTGTTCTGTTTCGACGGCGACCAGGCTGGCCGAAACGCCGCCTGGCGCGCCCTGGAAGCGACGCTTTCCAGTCTTCAGGATG GACGCCGCGCGCGCTTCCTGTTTTTGCCCGAAGGCGAAGACCCGGACACCCTGGTGCGCTCCGAAGGCACCGATGCGTTCAAGGCGCGCATCAATCAACA CGCACAACCGCTGGCCGATTACTTTTTCGAACAGCTGACCAAGGAAGCCGATCCACGCTCACTGGAAGGCAAGGCGCACATGGCGACGCTTGCCGCGCCA CTGATCGACAAGGTGCCGGGAGCGAATCTCAAGACCCTGATGCGTCAGCGCCTCACGGAAATAACCGGGCTCAACAGCGAGGCCGTCAGTCAGCTGGTGC AGAACGCGCCTGCTGAAGCGCCACCCAGCTACGACCCGAACATCGATTATGACGCAATGCCCGACTATGCTGATTATCAGCAACCCGGAGGGTACGAAGG ACAGCAGGACTGGACCGCGAAAAAAGGCACTGGCCAAGGCCAGAAAAAGTGGGAAAAGAAGCCGTGGGACAAAAAAGGCAAGCGACCTGACTACGAACCA CGTGTCCCGCGCACGCCGACCACCGTCGAACCACCAACACTGACAGCTTTGCGGACGTTACTGCATCATCCGGAGCTGGCAGCAAAGGTCGAAGATGCCA GTCATTTCGCGGCAGAAGATCACATTTATGCACAATTGTTGGTGGCTTTGCTTGAAGCTTTGCAAAAAAACCCCAACTTAAGATCACTGCAACTGATTGC ACGCTGGCACGGCACCGAACAAGGTCGCCTGTTGCGAGCACTGGCAGAGAAGGAATGGTTGATCGAGGCCGATAACCTTGAACAGCAGTTTTTCGACACT ATTACTAGTTTATCCGCCCGCCAACGCGAGCGTAGCCTGGAACATCTGATCAAGAAGGCACGTCAGACCGAGTTGAGCGCTGAAGAGAAAATTCAGCTGC GTGACCTGCTAATTCGTAATGTTCCTGCACAAACCCCGACCTCAACTGGCGCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTCATAGCTCGGGTATAATCCTCGGCTTGTTTTTTGCCCGCCAAGACCTTCAGTGGATAGGGTGTTATGTCCGGAAAAGCGCAACAGCAGTCTCGTATC AAAGAGTTGATTACCCTGGGTCGTGAGCAGAAGTATCTGACTTACGCAGAGGTCAACGACCACCTGCCTGAGGATATTTCAGATCCCGAGCAGGTGGAAG ACATCATCCGCATGATTAATGACATGGGGATCCCGGTACACGAGAGTGCCCCGGATGCGGACGCCCTGATGCTGGCCGATGCCGACACCGACGAAGCAGC CGCAGAAGAAGCGGCAGCAGCGTTGGCAGCGGTTGAAACCGACATCGGTCGCACCACTGATCCTGTGCGTATGTACATGCGTGAAATGGGTACGGTCGAA CTTCTGACCCGCGAAGGCGAAATTGAAATCGCCAAGCGTATCGAAGAAGGCATCCGTGAAGTGATGGGCGCAATTGCGCACTTCCCTGGCACGGTCGACC
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| Amino Acid Sequence |
>DNA primase
MAGLIPQSFIDDLLNRTDIVDIVSSRLQLKKTGKNYSACCPFHKEKTPSFSVSPDKQFYYCFGCGAGGNALGFIMDHDNLDFPQAVEDLAKAAGMEVPRE QSVKGQKPRQPTDSPLYPLLTAAAEFYRQALKSHPTRKSAVDYLKGRGLSGEIARDFSLGFAPPGWDNLHKHLGSDTLQQKAMIDAGLLIENAETGKRYD RFRDRVMFPIRDSRGRVIAFGGRVLGDDKPKYLNSPETPVFHKGQELYGLFEARKHNRSLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHLKRLF RVVPNVLFCFDGDQAGRNAAWRALEATLSSLQDGRRARFLFLPEGEDPDTLVRSEGTDAFKARINQHAQPLADYFFEQLTKEADPRSLEGKAHMATLAAP LIDKVPGANLKTLMRQRLTEITGLNSEAVSQLVQNAPAEAPPSYDPNIDYDAMPDYADYQQPGGYEGQQDWTAKKGTGQGQKKWEKKPWDKKGKRPDYEP RVPRTPTTVEPPTLTALRTLLHHPELAAKVEDASHFAAEDHIYAQLLVALLEALQKNPNLRSLQLIARWHGTEQGRLLRALAEKEWLIEADNLEQQFFDT ITSLSARQRERSLEHLIKKARQTELSAEEKIQLRDLLIRNVPAQTPTSTGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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