Pseudomonas sp. CFII64, CFII64_03222
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. CFII64 soap_scaffs_II64_half.Contig3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAAGACCTGCTGCGCTGCAGTCGCGGCGAGCTGTTCGGCCCAGGTAATGCGCAACTGCCCGCCCCCAACATGCTGATGGTTGATCGCATCACCCACATCA GCGAAGGCGGCGGCAAGTACGGCAAAGGTGAATTGGTCGCCGAGCTGGATATCAATCCAGACCTGTGGTTCTTCGCATGTCACTTCGAAGGCGACCCGGT AATGCCAGGCTGCCTGGGCCTCGACGCCATGTGGCAGCTGGTCGGTTTCTTCCTCGGTTGGCAGGGTTTGCCGGGCCGTGGTCGTGCATTGGGCTCCGGA GAAGTGAAATTCTTCGGCCAGGTGCTGCCAACTGCAAAGAAAGTCACCTATAACATTCAGATCAAACGCGTCCTCAAAGGCAAGTTGAACCTGGCCATCG CTGATGGCTCGGTCACTGTCGACGGTCGCGAGATCTACACCGCCGAAGGCCTTCGGGTCGGCGTCTTTACCTCCACTGACAACTTCTAAGGGTTATCCGC
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| DNA Sequence for Gene |
>CFII64_03222
ATGCGCCGCGTCGTTATCACTGGTCTGGGCATCGTTTCGTGCTTGGGCAATGACAAAGAGACCGTCTCCGCCAACCTGCGTGCAAGCCGCCCTGGCATCC GTTTCAATCCGGAATATGCCGAAATGGGTCTGCGTAGCCAGGTTTCCGGCTCCATTGACCTCAACCTCGAAGAACTGATCGATCGCAAGATCTATCGCTT CGTCGGCCATGCGGCAGCTTATGCCTACCTGGCCATGAAAGACGCCATCACCGATTCGGGCCTGACCGAGGAGCAAGTCTCCAATCCGCGCACCGGCCTG ATCGCCGGCAGCGGCGGCGCGTCGACCCTCAATCAGATGGAAGCGCTGGATATCCTGCGCGAAAAAGGCGTCAAGCGCGTCGGTCCGTATCGCGTTACGC GGACCATGAGCAGCACGGTTTCAGCCTGTCTGGCCACGCCGTTCAAGATCAAGGGCCTGAACTACTCCATCGCCTCTGCCTGCGCCACCAGTGCTCACTG CATCGGCAACGCCATGGAACAGATTCAGATGGGCAAGCAGGACATCGTTTTTGCCGGCGGTGGCGAAGAAGAGCATTGGAGCCAGTCGTTCCTGTTCGAC GCCATGGGCGCACTGTCCAGCCAGTACAACGAAACGCCGGAAAAAGCTTCCCGTGCCTACGACGCCAAGCGTGACGGCTTCGTCATCGCGGGCGGCGGCG GCATGGTCGTGGTCGAGGAGCTGGAACACGCTCTGGCGCGCGGCGCGAAGATCTACGCCGAAGTCGTTGGCTACGGCGCGACGTCCGATGGCTACGACAT GGTTGCGCCAAGCGGCGAAGGCGCCATCCGCTGCATGCAGATGGCCCTGTCGACTGTGGAAGGTCCGATCGACTACATCAACACTCACGGCACTTCGACT CCGGTCGGTGACGCGAAAGAGATGGAAGGCGTGCGTGAAGTGTTCGGCACCAACGCTCCGGCCATCAGCTCCACCAAAAGCCTGTCCGGTCACTCCCTGG GCGCCGCCGGCGTTCATGAAGCGATCTACTGCATGCTGATGATGGAAGGCAACTTCATGGCCGGTTCCGCCAACATCGACGAGCTGGACCCGGTCGTCGC TGATATGCCGATCCTGCTCAAGACCCGGGAAGATGCAAAAATCGACCAGGTCATGAGCAACAGCTTCGGCTTTGGTGGCACCAACGCCACGCTGGTGATG AAGCGCTGGCAGGGCAAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTCGCCCCGTTTCGCAGCTGTCAGAAAGGCGCCTCTCGAGGCGCCTTTTTTGTTGGGTCGATCCAGCCTATGCAGGTAGGATATTTCCTTTGCATGCGCG CCCAGCCGAGAAACCCTGATGCTCACGATCAAACCCCGCGCCGAAGACGTCGAAGGCCAACCCATCCTGCGCCCGCTGCCCTCGGCCAAATGCCGCAGCG TCGGGCCGTTCGTGTTTTTCGATCACATGCTGGAAACCGCCTACGCGCCAGGCACCGGCATGAACATTCGCCAGCACCCGCATATTGGCCTGTCGACCCT GACATACCTGTTCGAAGGCCGCCTGCTGCACAAGGACAGTCTCGGCAGCGACCAACACGTCCAGGCGGGAGAAGTCAGCTGGATGACCTCAGGCGCAGCC ATTGCCCATATCGAACGCACGCCCGACGATCTGCTGGCCAGCGGCTCCCGGATGCACGGCCTGCAAGTCTGGCTGGCATCACCCAAGGCTTTTGAATCTG
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| Amino Acid Sequence |
>3-oxoacyl-(acyl carrier protein) synthase I
MRRVVITGLGIVSCLGNDKETVSANLRASRPGIRFNPEYAEMGLRSQVSGSIDLNLEELIDRKIYRFVGHAAAYAYLAMKDAITDSGLTEEQVSNPRTGL IAGSGGASTLNQMEALDILREKGVKRVGPYRVTRTMSSTVSACLATPFKIKGLNYSIASACATSAHCIGNAMEQIQMGKQDIVFAGGGEEEHWSQSFLFD AMGALSSQYNETPEKASRAYDAKRDGFVIAGGGGMVVVEELEHALARGAKIYAEVVGYGATSDGYDMVAPSGEGAIRCMQMALSTVEGPIDYINTHGTST PVGDAKEMEGVREVFGTNAPAISSTKSLSGHSLGAAGVHEAIYCMLMMEGNFMAGSANIDELDPVVADMPILLKTREDAKIDQVMSNSFGFGGTNATLVM KRWQGK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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