Pseudomonas sp. CFII64, CFII64_03142

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CFII64 soap_scaffs_II64_half.Contig3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTTCCACCGGGCGCAGCACCGGCGTCAGCCAGGTCCGCTCGCCTTCCACCACCCGATAATAGAAACGCCCAAGCAGCGGCGCGGGCAACAGCACCAGCGC CAGGAAAGCCAGAATCAATAGATAGTCATAACTGTGCATGGCTGCTCCTAAGTCCGGCCTGCGCGTAGCAGCGCAACCAGCAAGTAAATGAACAGCCCTG CCGCCAACAGCAGGGACACCCCATCCAGAACGCTCATCGAAATACTCCGTCGCTGCGGCGATTGCCGCGTGTGAGCCATTGTCGGGACAGAGGGTGTAAA GGAACGAGATCGACGGCTGCGGGACGGCGTAAAGAAGGCGTAAAAATCGGGGGGCGGAGGCGCTGCAAAGCCGTCGGCGCCCGCTGGCTCCAACGGATCT CTGGGTTGCTGCCACCGTGCCACCTGTTACTTCTGACAGGTTCCAGATTCTGCGCAAGGCGTTATCGTGACGGGGTGTGACACATGACAGGGAGTCGACG
DNA Sequence for Gene
>CFII64_03142
ATGAATCATTCAGCACACAACAGCGCCCATGTGACGAACGTCCATAGGCACCTGGCGACGCCAACAGTGCAATTGACCGTCAAGGAGATGGAAGTCCTGC AATGGGCAGCGATGGGTAAATCCGCGTGGGAGATCTCGCGTATTCAGGACCGGACCGAAGCTGCGGTCAATTTCCACATGTGCAACATTCGCCGTAAATT CGGGGTCAATTCCCTCAGGGCCGCCTTGATCAAGGCCATTGAGCAGAGAGTGATTGTGCTGGAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CATTCAGACGCGGACCTTTGTACCGATCGCGATACATTTCCGACATTCCCCCGACACCCGATCACCCCACCCTTTCGCCGCGCCTCCCGGCGAAGTAGCA TGCGGGGGCGTTGATCTTCAACAGCGGCCAGTGATGGCGGCATCACCAGGCGGCAGTCGCATCATGCAAGCAAGCTCCGACATTCCTGTAGACAACGCCC CGATTGCGGACCAGCGCTGGAACACGCGCGCCTTGATCGTCGACGACGATGTGCCGATCCGCGAACTGCTTTGCGATTACCTGGCGCGCTTCAACATTCA GTGCCGGGGCGTGACCGATGGCAACGAAATGCGCCAGGCGCTGGAGCAGGAAACCTTCGACGTGATCGTGCTCGACCTGATGCTGCCGGGTGAAGATGGC CTGTCGCTGTGTCGCTGGCTGCGCGGCACGTCGGACATTCCGATCCTGATGCTCACCGCTCGTTGCGAACCCACCGACCGGATTATCGGCCTTGAACTGG
Amino Acid Sequence
>LuxR family transcriptional regulator
MNHSAHNSAHVTNVHRHLATPTVQLTVKEMEVLQWAAMGKSAWEISRIQDRTEAAVNFHMCNIRRKFGVNSLRAALIKAIEQRVIVLE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site