Pseudomonas sp. CFII64, CFII64_02821

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CFII64 soap_scaffs_II64_half.Contig2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGCGCAGATGCTGGAAAGGGCCCGGCAAGGGGCTTGAGTAGAACGCTCGGTTTGCTGTAGGACCGGCTTTAGCCGGGAGCTCAATCGACGCGGTTTGCTG TAGGACCGGCTTTAGCCGGGAGCTCAATCGACGCTTTCGCGACTAAAGTCGCTCCTACGGCCAATTCGCGGGCAAGCCTCGCTCCAACGGGAAATAGTCG GAAATGTGAAAAGTTTATTCATTTCACTAAATTTTCACTTTCCTGTTCGTTCATTCAAAACTCGATACCGTTTCCGCTGCCCGCTTCATTCCTGGTCGCG TGTCTTTGTGCAGCAAACACGGCGCCTTGAGGCTAACGACGAGCAACTCATTTTCCACTGGTCAGCCATCCTCAGAGAAGGCGGCCCGCCAACTTAACGA TTCAAACGGGGTGATTCATCGCATGAAATCCAGGAACCAGACATTTGCCAGGCGCTTGTTGAAATCGCCGATGCCTTCATGGAGAACTTCTGCATCCGTA
DNA Sequence for Gene
>CFII64_02821
ATGGTATTGGGGTTGGCACTGGGAACGTGCGAAGGCGTATTCGCCGAAGTCCGTCACGTGAATATTCCCGCTCAGCCGCTGGACGCCGCGCTGAACGCGC TGGGCGCGCAAACCGGGCTGCAAGTGCTGTATCGGCCGGAAATGGTCAGCGGCAAGAAGTCCGTGGCAGTCAACGGTGATCTTGAACCGGGTGCCGCACT GGATAAATTGCTCAATGGCGCCGGCCTGACTTATCGCATCGAGAACAACACGATTTTCCTCAGCGAAGAGTCGCTTGTCGGCGGTGCCATGGAATTGGGC GCGACGACGATTCAGGGCCAGGGCATGGGCCAGGCGACTGAAAACTCCAAGTCCTACACCACCGGTTTGACCAGCGTAGGCTCGAAAACCCCCACCAGTC TGCGCCAGACGCCGCAGTCGATTTCCATCATCAGCCAGCAAATGATGGCTGATCAGCAGTTGACCGATATCAACGATGCACTGCGCATGACGCCGGGCAT CACGGTGCAGAACAGCACTTATCGGACGTTCGACATCCTGTCCCGTGGTTTCAAGATCGAAAACTTCCAGCTCGATGGTGCCGCGCCGATGGCGTTGGGC AGTTCGCTGGGCAGTTTCTATTCGTCCAACGTCTACGATCTGGCCGAGTTCGACCACATTGAAGTGCTGCGTGGTTCGGCGGCATTGTTCGGCGGCACGG GTGATCCGGGCGGCATCGTCAACATGGTGCGCAAGCGCCCGCTGGACACCTACCAACTCAAACTCACCGCGTCGGCGGGTAGCTGGGATAACTATCGCCA GGAAGTGGACCTCACCGGTCCGATCGCCTTCGACGGCAAACTGCGCGGCCGCCTGGTGGTTGCCAACACCGATCGGCAGTATTTCATCGATAACCGCAGC ACGGAAAAACCGTTCGTTTATGGTGTCCTCGAAGCTGACGTCACCGATGACACCATGCTCACGGCCGGTATCCGCTATAACAAAGCCCATGAAAATGGCA CGCAAAACTCTGTACCGCGTTACCTCGACGGTTCCGATATCGGTCTGCCGCGTCACACCAGTCTGGGTCAGGCCTGGGGTTATACCGACACCACCGGTCG CGAGATTTTCGCCAAGATCGACCACAAGCTTTCCGATAACTGGAAACTCAACGTCTCCTATACCGATCTCTGGGATGTCGGTTACTTCAAGACCACGACC GTCAGCGGTGTAGGCGTCAACCAGGCGACCGGAGGCGGGTTGTCCTGGAGCAGCACGACTGCCAAACAGGAAAACCAGCAGCGCATGTGGGACACCAACC TGTCCGGCACCTTCGACATGTTCGGCCTGAAACACGATCTGGTGGTGGGCGCCGACTATCAGGACGTGACCAGCCGCTGGCTCGGGGTAGCTCGAGTGAT AGGCGGGCCAATCAACCCTTACGACCCGGACAGCACGCCGTTCCCCGAGCCGCCAAACAACACCAACTACACCCGCGATTACAGCCCCAACGACCAGAAG CAGTACGGCCTGTATGGCAGCTTGCGCATGCAGTTGGCCGAGCCGCTGCATTTGATCCTCGGTGCGCGGGTGCAACGCTACAAATTTGACCAGACCTACA AGACGCTTACAGCGGGTACCTGGAGAACCTCCTCGGAGATCTCCATGCGCGAACCGACCAAGGTCACGCCATATGGCGGTCTGGTCTATGACCTCAATGA CGAGTGGTCGGTGTACGGCAGCTATTCGGAGATCTACAAGCCGCAGGTCAGTCTGCTGAGCGGTTCGGGCTCCTCGCTCGACGCCATGGAAGGCAAGACC TATGAAACCGGTCTTAAAGGCGAGTTGTTCGGCGGCAGCGTCAACACTAACTTCGCGCTGTATTACACCAAGCGCGACAATCAGGGCGTGCGCGACCCGG CTTATCCCGCCAACGACTTTGACTTCTCCGGCAGCTGCTGCTGGATTGGTAGCGGCGAAGTAGTGAGCAAGGGCGTCGACATGGAAGTGTCGGGTGAAGT CATGCCTGACTGGATGTTGATGGCCGGTTATACCTACAACCAGAACCACAACAAGAGCTCCAAGACGCTGCTCAGCACCCAGACGCCGAAGCACTTGTTC AAACTGTTTTCCACCTATCAGCTGCCCGGCGTGTTGTCGGACTTCAAAGTGGGTGGCGGCGTGAACCTGCAAAGCTCCAATTACTTCAGCGGCACGGTGA CCAACAGCGGCGGCACCAACACCTACGACTTCGATCAGGCGGGCTATGCGGTCTGGAATGCGTTGGCCGAATACAAGGTCGACGAACACTGGACCGTCAC CTATAACGCCAACAACATTTTCGACAAAAACTATTACTCCACCGTGGGCTCGACATCCGCCACCAACTGGTACGGCGAACCGCGCAACCACATGCTGACC TTGCGCGGCACCTTCTGGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CAGAACGCGCTTGAATGAAAAAGGGGAGCCAGATCACTGGCTCCCCTTTTTTGTTACCGATGTTGCAGGCCGACAATCAGTCGACGACAGCAGAAGGGGC CTTGGTTGGCTCCTCGTCCTCTTTCATCTTGCGAAAGTACGTCGAAAGCAGGGCGCCGGATATGTTGTGCCAGACGCTGAACAGCGCGCTGGGCACCGCC GCCAATGGCGAGAAGTGCGCGCTGGCCAGTGCCGCGCCCAGCCCGGAGTTTTGCATGCCGACTTCCAGCGCCAGGGATTTGCGTTGCGCCAATGGCAGCT TGAACACCTTGCCGGTGAAGTAACCCAGCAGAAAACCGAAGCTGTTGTGCAGGATCACCACAAGCATGATCAGCAGGCCGGACTCGGCGATTTTCGCCTG ACTGGCGGCAACCACGGCGCAGACAATCATCACGATGCTGACCACCGAAACCAGTGGCAATACGTCCACAGCATAGCTGACCCGTGCGCCAAGCAAACGC
Amino Acid Sequence
>TonB-dependent siderophore receptor
MVLGLALGTCEGVFAEVRHVNIPAQPLDAALNALGAQTGLQVLYRPEMVSGKKSVAVNGDLEPGAALDKLLNGAGLTYRIENNTIFLSEESLVGGAMELG ATTIQGQGMGQATENSKSYTTGLTSVGSKTPTSLRQTPQSISIISQQMMADQQLTDINDALRMTPGITVQNSTYRTFDILSRGFKIENFQLDGAAPMALG SSLGSFYSSNVYDLAEFDHIEVLRGSAALFGGTGDPGGIVNMVRKRPLDTYQLKLTASAGSWDNYRQEVDLTGPIAFDGKLRGRLVVANTDRQYFIDNRS TEKPFVYGVLEADVTDDTMLTAGIRYNKAHENGTQNSVPRYLDGSDIGLPRHTSLGQAWGYTDTTGREIFAKIDHKLSDNWKLNVSYTDLWDVGYFKTTT VSGVGVNQATGGGLSWSSTTAKQENQQRMWDTNLSGTFDMFGLKHDLVVGADYQDVTSRWLGVARVIGGPINPYDPDSTPFPEPPNNTNYTRDYSPNDQK QYGLYGSLRMQLAEPLHLILGARVQRYKFDQTYKTLTAGTWRTSSEISMREPTKVTPYGGLVYDLNDEWSVYGSYSEIYKPQVSLLSGSGSSLDAMEGKT YETGLKGELFGGSVNTNFALYYTKRDNQGVRDPAYPANDFDFSGSCCWIGSGEVVSKGVDMEVSGEVMPDWMLMAGYTYNQNHNKSSKTLLSTQTPKHLF KLFSTYQLPGVLSDFKVGGGVNLQSSNYFSGTVTNSGGTNTYDFDQAGYAVWNALAEYKVDEHWTVTYNANNIFDKNYYSTVGSTSATNWYGEPRNHMLT LRGTFW
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site