Pseudomonas sp. CFII64, CFII64_02571

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CFII64 soap_scaffs_II64_half.Contig2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATCGAAGAGCGCGACGGTCGCGAACTGCTGGAAATCGGCGGGCAACGGGTCGGTGCGGATGTCGATGCGTTCAATCCGGTGTTTGATGTGACCCCGGCTG ATCTGATTGACGCGATCGTGACTGAAAAGGGCATCGTCGAGCGCCCGGATGCCGCGAAAATGACTCAATTGATGTGTCGCAAACGCCTGCATTGAGTGCT TTGTTGCGCGATCAGTCGTTTGTCTTGAGTGGGCTATGCGGTCCTGTAAGCGTTTCTCAGGCGTCTTACAGTAGCGTGGCTCATTTTCAGGGCTTTCAAA GGATAGGTGCGTAGCGGCGTTTGTGGTAACATCCGGCGGTTTCCAAGGGCGCTATTCGTAGCCGCCCTTACTGCGCAGATCCAGAGCTTAACTCGTTGAT TTGTCGTAAGTCGTTGCCAGGCAAATGCCAGCAGCGGCGAGCTTCGTTCGTCCCGCATGGATGTGACGAAGTTTCACCAGAAAAAGGAATCAGGCTTCTC
DNA Sequence for Gene
>CFII64_02571
ATGGGCGAACTGGCCAAAGAAATCCTCCCGGTCAATATCGAAGACGAGCTGAAACAGTCCTACCTTGACTACGCGATGAGCGTGATCGTCGGTCGGGCAC TGCCGGATGCGCGCGATGGCTTGAAGCCCGTGCACCGACGTGTGCTGTTCGCGATGAGCGAGCTGGGTAACGACTGGAACAAGCCGTACAAGAAATCCGC CCGTGTGGTCGGTGACGTTATCGGTAAGTACCACCCGCACGGCGACACTGCTGTCTACGACACCATCGTCCGGATGGCGCAGCCGTTCTCGCTGCGCTAC CTGCTGGTAGACGGTCAGGGCAACTTCGGTTCGGTGGACGGCGACAACGCCGCCGCCATGCGATACACCGAAGTGCGCATGACCAAGCTGGCGCACGAAC TGCTGGCCGACCTGCACAAGGAAACCGTGGATTGGGTGCCGAACTACGACGGCACGGAAATGATCCCAGCGGTCATGCCGACCCGGATTCCCAACCTGCT GGTCAACGGCTCCAGCGGTATTGCCGTGGGCATGGCGACCAACATTCCGCCGCATAACCTCGGTGAAGTCATCGACGGTTGCCTGGCGCTCATCGACAAC CCCGAGTTGACTATCGATGAGTTGATGCAATACATCCCGGGCCCCGACTTCCCGACAGCCGCGATCATCAACGGTCGCGCCGGCATCGTCGAAGCCTATC GCACCGGTCGTGGCCGCATTTACATGCGCGCCCGCTCGATGGTGGAGGACATCGACAAGGTCGGTGGCCGCCAGCAGATCGTCATCACCGAACTGCCGTA CCAGCTGAACAAAGCCCGCCTGATCGAGAAGATCGCCGAGCTGGTTAAAGAGAAGAAACTCGAAGGCATCACTGAACTGCGCGACGAATCCGACAAAGAC GGTATGCGTGTCGTGATCGAGCTGCGTCGTGGCGAAGTGCCTGAGGTCATCCTCAACAACCTTTATGCCCAGACCCAGCTGCAGGCCGTGTTCGGCATCA ACATCGTTGCGCTGATCGATGGTCGTCCGCGAATCCTGAACCTCAAGGATCTGCTCGAAGCCTTCGTCCGTCACCGCCGCGAAGTGGTTACCCGGCGTAC CGTTTTCGAGCTGCGCAAAGCCCGTGAACGTGGGCATTTGCTCGAAGGCCAGGCGGTTGCCCTGTCGAACATCGACCCGGTCATTGCCCTGATCAAGGCC TCGCCGACACCGGCCGAAGCCAAGATCGGGCTGATTTCCACCGCCTGGGAATCCAGCGCTGTAGTGGAAATGGTCGAGCGCGCCGGTGCCGATTCATGCC GCCCGGACAACCTTGACCCGCAATATGGCCTGCGTGACGGCAAGTATTTCCTGTCGCCGGAGCAGGCTCAGGCGATTCTGGAACTGCGTCTGCACCGCCT GACCGGTCTGGAACACGAAAAACTGCTGACTGAATACCAGGAAATCCTGGCCCAGATCGGCGAACTGCTGCGCATCCTCAACAGCGCCACGCGTCTGATG GAAGTCATCCGCGAAGAGCTGGAGCTGATCCGCGCCGAATACGGCGACGTGCGCCGCACCGAGATTCTCGATGCGCGCCTGGATCTGACCCTGGGTGACC TGATCACCGAAGAAGAGCGCGTCGTCACCATTTCCCACGGCGGCTATGCCAAGACCCAGCCATTGGCGGTCTATCAGGCGCAGCGTCGCGGCGGCAAAGG CAAATCGGCGACCGGCGTCAAGGATGAGGACTACATCGCTCACCTGCTGGTTGCCAACAGTCACACCACGCTGCTGATGTTCTCCAGCAAAGGCAAGGTG TACTGGCTCAAGACTTACGAAATCCCGGAAGCATCCCGCGCTGCGCGCGGGCGTCCGCTGGTCAACCTGCTGCCGCTCAGCGAAGGTGAATACATCACCA CCATGCTGCCGGTAGACCTGGAAGCCATGCGCAAGCGTGCTGACGAGGAAGAAGGCGACGTCATCGAAGGCGAAATCGACGACGCCGACACCAACGAAGC AAGCACCGAAACCGAAGAAGAGCGCAAGGCGCGTATCAAGGCTGCAGACAAGAAGAAGGCACCGTTCATCTTCATGTCCACCGCCAACGGCACCGTCAAG AAAACTCCGCTGGTGGCTTTCAGCCGTCAACGTAGCGTCGGCCTCATCGCGCTGGAGCTGGACGAAGGCGACATCCTGATCTCCGCGGCCATTACCGATG GCGAGCAGGAAATCATGTTGTTCTCCGATGGCGGCAAGGTGACGCGCTTCAAGGAATCCGACGTTCGCGCCATGGGCCGTACCGCTCGCGGTGTGCGCGG CATGCGTCTGCCGGAAGGGCAGAAGCTGATTTCCATGCTGATCCCGGAAGAAGGCAGCGAGATTCTCACTGCTTCGGAACGTGGTTTCGGCAAGCGCACG GCGATTTCCGAGTTCCCTGAATACAAGCGTGGCGGTCAGGGCGTTATCGCCATGGTCAGCAACGAACGTAACGGCCGCCTGGTCGGTGCGGTTCAAGTGC TCGACGGCGAGGAAATCATGCTGATTTCCGATCAGGGCACGCTGGTTCGTACCCGTGTCGACGAAGTTTCCAGCCTGGGCCGTAATACCCAGGGCGTCAC GTTGATCAAGCTGGCCAGCGACGAAAAACTGGTAGGTCTGGAGCGCGTGCAGGAACCTTCGGAAGTCGAAGGCGAAGAACTCGAAGGCGTTGAGCTGGAC GGTGAAGAGCTGGAAGGCGACGCTATTGAGGGCGAAATGCTCGATATCGCTGAAGGCGATGCTGGCGACGAGCTGCAAGCCGACGCCGCGCCGGACGACG AAGAACCGCAGAGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCTGATGTGTAAATAGCAGGAAGCCCAAGGGTTTCCTGCAGGAGTTGCCGAAGGCTGCGACCGGTTCAAAACCGTTCGCAGCCTTCGGCACTTCCAACTT CAAATGACCCAAGCCTGAGAAATCAGCGCGTAGTGAGAGTGGATATGAGCAAGCGAGCCTTTAACTTCTGCGCAGGTCCTGCTGCGCTACCTGAAGCTGT TCTGCTGCGTGCCCAGGCGGAACTGCTGGACTGGCATGGCAAAGGCCTGTCCGTCATGGAAATGAGTCATCGCAGCGATGAATTCACCTCCATTGCCAAC AAGGCCGAGCAGGATCTGCGCGACCTTCTGACGATTCCCTCAAACTACAAAGTATTGTTCCTGCAAGGCGGCGCCAGCCAGCAGTTCGCCCAAATTGCAC TGAACCTGCTGCCTGAAGAAGGCACCGCCGACTATATCGACACCGGTATCTGGTCGCAGAAAGCCATCGAAGAAGCCTCGCGTTACGGCCACGTCAACGT
Amino Acid Sequence
>DNA gyrase subunit A
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWNKPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRY LLVDGQGNFGSVDGDNAAAMRYTEVRMTKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMATNIPPHNLGEVIDGCLALIDN PELTIDELMQYIPGPDFPTAAIINGRAGIVEAYRTGRGRIYMRARSMVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD GMRVVIELRRGEVPEVILNNLYAQTQLQAVFGINIVALIDGRPRILNLKDLLEAFVRHRREVVTRRTVFELRKARERGHLLEGQAVALSNIDPVIALIKA SPTPAEAKIGLISTAWESSAVVEMVERAGADSCRPDNLDPQYGLRDGKYFLSPEQAQAILELRLHRLTGLEHEKLLTEYQEILAQIGELLRILNSATRLM EVIREELELIRAEYGDVRRTEILDARLDLTLGDLITEEERVVTISHGGYAKTQPLAVYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLMFSSKGKV YWLKTYEIPEASRAARGRPLVNLLPLSEGEYITTMLPVDLEAMRKRADEEEGDVIEGEIDDADTNEASTETEEERKARIKAADKKKAPFIFMSTANGTVK KTPLVAFSRQRSVGLIALELDEGDILISAAITDGEQEIMLFSDGGKVTRFKESDVRAMGRTARGVRGMRLPEGQKLISMLIPEEGSEILTASERGFGKRT AISEFPEYKRGGQGVIAMVSNERNGRLVGAVQVLDGEEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLASDEKLVGLERVQEPSEVEGEELEGVELD GEELEGDAIEGEMLDIAEGDAGDELQADAAPDDEEPQS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site