Pseudomonas sp. CFII64, CFII64_01261

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CFII64 soap_scaffs_II64_half.Contig2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCGTCGCAGCAAACTGGGCCTGTTCATGACCGCTGAAGAGCGTGCTGGCGTCCAGCAATACCTGGATGTTGTGGCACGTAGAAAAGGCGCTATCGAAGC GGCTTGAAATATGAATCCGCAGGACCGGCTTCAGCCGGAAGCGCAAGAGCTCTGACACCGGAGCTGCTGCCCATGGACAGGCCTCCTCCCGGCTGAAGCC AGTCCTACGGATACATTTGGTTCGATGGTTATATCATTCGGTTTTCCGAACGTGCCCACCTCCATAGTTCGGCTTCCCGGACGCTTCAAGCCCCCGCCCC GCCCCCGATAAAACTTTAAATCCTTTTAAAACAATGAGTTAACCTTGCGCTCCGTGCTTGGCACGGCTCCTGCTCTACACTACTTGTCGATCGCTTCGAC AGTAACGTGTGCCCCTGTCGGCCGCCGTTGAAGCATTCGCCGAACAAGCGGGCCACACCTGTTTCGGCCCCATAAAAAAAACAAAGTCGAGGAATTACAG
DNA Sequence for Gene
>CFII64_01261
ATGCGCATCGTCCCCCATCTTTTGGGCGCAGCAATCGCTGCCGCTCTGATGACCACTCCAGTTTTCGCCGCCGAACTCACCGGCACACTGAAGAAAATCA AAGAGTCCGGCACCATCACCCTCGGGCACCGCGATGCTTCGATTCCGTTTTCCTATATCGCTGACGCTTCCGGCATTCCGGTTGGCTACTCCCACGACAT TCAGCTGAAAATCGTCGAAGCCATCAAAAAAGACCTGAACATGCCGGACCTGAAGGTCAAGTACAACCTGGTCACTTCCCAGACGCGTATCCCGCTGGTA CAGAACGGCACCGTTGACGTTGAATGTGGTTCAACCACCAACAACGTTGAACGCCAGCAACAGGTTGACTTCTCGGTAGGCATCTTCGAAATCGGCACCC GCTTGCTGTCCAAGGCTGATTCTTCGTACAAGGATTTCGACGATCTGAAAGGCAAGAACGTCGTGACCACCGCCGGCACTACGTCCGAGCGCATCCTCAA GTCGATGAACGCCGACAAGCAAATGGGCATGAACGTCATTTCCGCCAAAGACCATGGCGAGTCTTTCCAGATGCTGGAATCCGGTCGTGCCGTTGCGTTC ATGATGGATGACGCGCTGCTGGCAGGCGAAATGGCCAAAGCCAAGAAGCCAACTGACTGGGCTGTAACTGGCACGGCGCAGTCGTACGAAATTTACGGCT GCATGGTCCGTAAAGGCGACGAACCGTTCAAGAAAGCGGTCGACGACGCAATCGTGGCGACCTACAAGTCCGGCGAGATCAACAAGATCTACGGCAAGTG GTTCGAACAACCGATCCCGCCTAAAGGCCTGAACCTCATGTTCCCGATGAGCGACAAGGTCAAAGAACTGATCAGCAACCCGACCGACAAAGCGGCTGAC GACAAAAAGGCTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGCCCATCAAGATATTCCTGAGAGGGCACGTGCCCTCTCAGGATGCCGTTGCGTGTATCTGGATCGATCAGAGGGGAGACCCTGATGAATTACAACTGG GACTGGGGTGTGTTCTTCAAGTCCACCGGCGTTGGCAGCGAAACCTATCTGGACTGGTATATTTCCGGTCTGGGCTGGACTATCGCAATCGCTGTCGCTG CCTGGATCATAGCCTTGCTGCTGGGCTCGGTGCTGGGTGTCATGCGCACCGTACCGAACCGACTGGTAGCAGGCATCGCCACGGTTTACGTGGAAATCTT CCGTAATGTGCCGCTGCTGGTACAGCTGTTCATCTGGTACTTCCTGGTACCGGATCTGCTGCCTGAACACATTCAGGAGTGGTACAAGCAGGACCTCAAC CCGACGACTTCAGCGTTCCTGAGCGTGGTGGTCTGTCTGGGTCTGTTTACCGCTGCCCGAGTCTGCGAACAGGTGCGCACCGGCATTCAGGCGTTGCCTG
Amino Acid Sequence
>amino acid ABC transporter, periplasmic amino acid-binding protein
MRIVPHLLGAAIAAALMTTPVFAAELTGTLKKIKESGTITLGHRDASIPFSYIADASGIPVGYSHDIQLKIVEAIKKDLNMPDLKVKYNLVTSQTRIPLV QNGTVDVECGSTTNNVERQQQVDFSVGIFEIGTRLLSKADSSYKDFDDLKGKNVVTTAGTTSERILKSMNADKQMGMNVISAKDHGESFQMLESGRAVAF MMDDALLAGEMAKAKKPTDWAVTGTAQSYEIYGCMVRKGDEPFKKAVDDAIVATYKSGEINKIYGKWFEQPIPPKGLNLMFPMSDKVKELISNPTDKAAD DKKA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site