Pseudomonas sp. CF149, CF149_22318
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. CF149 soap_scaffs_149.Contig44.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AACAATCAAGAACTGTGCCGTGTTACTTGCCCCTTCCCCGCACACTGGCTGTTACTACTTGCAACACCCTGTTTTAAACTGTTTTAACCCATGAGCCAAA TGACTCTCATTCCTATTAAAGGCGTTCACCTTCAACTTATCGCTTATTTGATATAGCCCACTGAAACATCACGGTGCACGCTTATTTATTTTTATCGCTA CCTCTCCCTTCTCCCGCTGACTCAAGCGCCTGATTTAGCATAAGAAACTTCGCTTATATTTGAATCCTGTCAAGTGCGTCAAAATGGTGAGGCCGTGCCA CATTTTGGTGAATTCAAAATAATTTATATATAAATCATGTACTTAGTCATTAATTAAGCTATTAAAAATAAAGTTTGATCATTTTCCAACAACCCTCTAG ATTTCATTCCTGACACCAGTGACAGGATTCAGCCTGTGCGCTAACTTTAATAACAACATTTAGAACCGGTTATAGCCGGTCAGCCTGCGAGGAACTCGGT
|
|
| DNA Sequence for Gene |
>CF149_22318
ATGTCACTGTTAATCCGTGGCGCTACACTTGTGACCCATGATGAAAGTTATTGTGCCGATGTTTATTGCGCCGACGGTCTCGTCCGCGCAATTGGTACTA ATCTTGATGTTCCGTCCGGCTGCGAAGTTCTCGACGGCCGCGGTCAATATTTAATGCCCGGCGGCATTGATCCCCACACTCATATGCAACTCCCGTTTAT GGGCACAGTGGCCAGTGAAGACTTTTTTAGTGGCACGGCAGCCGGTTTAGCAGGTGGCACAACTTCCATTATCGATTTTGTCATTCCCAATCCTCAGCAG TCCCTGCTGGAAGCTTTTCATCAGTGGCGCGGGTGGGCAGAGAAGTCGGCGTCGGACTACGGCTTTCATGTCGCTATCACCTGGTGGAGCGAACAGGTGC GCGAAGAAATGGCCGAACTGGTCAGCCAGCATGGCGTCAACAGCTTTAAACATTTCATGGCTTACAAAAACGCGATCATGGCCGCAGACGACACTCTGGT CGCGAGTTTTGAGCGTTGCCTGGAATTGGGCGCGGTGCCCACAGTGCATGCCGAAAACGGCGAACTGGTGTATCACCTGCAACGCAAACTCATGGCCCAG GGCATGACAGGACCGGAAGCTCACCCGCTGTCACGTCCTTCTCAAGTTGAGGGCGAAGCCGCCAGCCGGGCAATCCGCATCGCCCAGACCATTGGCACGC CGTTGTATCTGGTGCATGTGTCAACCCGTGAAGCGCTGGACGAAATCACCTATGCCCGCAGTCAGGGGCAGCCGGTGTATGGCGAAGTTTTGGCCGGACA TCTGCTGCTCGATGACAGCGTGTACCAACATCCAGACTGGCAAACCGCCGCAGGTTACGTAATGAGCCCACCCTTCCGCCCACGCGGGCATCAGGAAGCA CTCTGGCATGGCCTGCAGTCGGGCAATCTGCACACGACAGCCACCGATCACTGCTGCTTTTGCGCCGAACAAAAAGCCGCCGGGCGCGACGATTTCAGCA AGATCCCCAACGGCACGGCAGGTATCGAAGACCGCATGGCAGTGCTCTGGGATGAGGGCGTAAACACAGGCCGGTTGTCGATGCAGGAGTTCGTCGCACT GACCTCCACCAACACCGCCAAAATTTTCAATCTGTACCCGCGCAAAGGCTCGATCCGGGTCGGCGCCGATGCCGATCTGGTGCTGTGGGACCCGTTGGGT ACGCGCACCATTAGCGCCAAGACCCACCATCAAAAAGTCGATTTCAATATTTTTGAAGGCAAGACCGTGCGCGGCGTCCCCAGCCATACCATCAGTCAGG GCCGTGTGGTGTGGGCCGATGGCGATCTGCGGGCAGAACGCGGAGCGGGCCGCTATATCGAACGCCCGGCCTACCCCGCCGTGTTCGACTTGCTAAAAAA ACGCGCCGAGCATCAGCAGCCCGTGGCTGTTAAACGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GTGGCTAACCACTGCCCGACAGAGGCAGGACGATCCCCACAACCGTGAGGCAATCACCGTGATCAAGTCCCTGAACCATTTACCGCACCCCCATGAAAAT GCGCAGGTGTTGGCCAGTCACTTCACCGACCTGGCGCCACCGCTCAATGCCCGTCAAGCCGTACTGGAGAGCTCGCGCTGCCTGTATTGCTACGACGCAC CTTGCGTCAATGCGTGCCCCAGCGAGATCGATATCCCGTCGTTTATTCGCAATATCCAGCAGGAAAACGTCCAGGGCGCCGCGCACAAGATTCTCTCGGC CAACATTTTGGGCGGCAGTTGTGCCCGGGTTTGCCCGACGGAGGTGCTGTGCCAGCAAGCCTGTGTGCGCAACAACAGCCAGGAATGTGCCCCGGTACTG ATCGGTTTACTACAGCGTTATGCGGTCGACCACGCCCAATTCAGCGAGCATCCATTCACCCGTGCGGCTCCTACCGGCAAACGCATCGCCGTGGTCGGCG
|
|
| Amino Acid Sequence |
>phenylhydantoinase
MSLLIRGATLVTHDESYCADVYCADGLVRAIGTNLDVPSGCEVLDGRGQYLMPGGIDPHTHMQLPFMGTVASEDFFSGTAAGLAGGTTSIIDFVIPNPQQ SLLEAFHQWRGWAEKSASDYGFHVAITWWSEQVREEMAELVSQHGVNSFKHFMAYKNAIMAADDTLVASFERCLELGAVPTVHAENGELVYHLQRKLMAQ GMTGPEAHPLSRPSQVEGEAASRAIRIAQTIGTPLYLVHVSTREALDEITYARSQGQPVYGEVLAGHLLLDDSVYQHPDWQTAAGYVMSPPFRPRGHQEA LWHGLQSGNLHTTATDHCCFCAEQKAAGRDDFSKIPNGTAGIEDRMAVLWDEGVNTGRLSMQEFVALTSTNTAKIFNLYPRKGSIRVGADADLVLWDPLG TRTISAKTHHQKVDFNIFEGKTVRGVPSHTISQGRVVWADGDLRAERGAGRYIERPAYPAVFDLLKKRAEHQQPVAVKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|