Pseudomonas sp. CF149, CF149_21098
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. CF149 soap_scaffs_149.Contig43, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTCAGCCAGATTTCCCAGCCCAGACCCCAGGCGCCCAGTGTTGGCGATTCCCAGTTGTCTTCGACGAAACGAATGTCGTGTACCAGAGGGTCCAGGCCGA TATGTTTCAGCGAGCCCAGGTACAGCTCCTGGAAATTTGGCGGATTAGGCTTGAGTACCACCTGAAACTGGTAGTAGTGCTGCAAACGGTTCGGGTTTTC GCCGTAGCGGCCGTCAGTCGGGCGACGACTGGGCTGCACATAAGCGGCGTTCCAGGTTTCCGGGCCCAGAGAGCGCAGAAACGTGGCGGTATGGAATGTG CCGGCGCCCACTTCCATATCGTAGGGCTGAAGCACCACACAACCTTGCTCGGCCCAGTATTGCTGGAGGGCGAGGATCAAGTCTTGGAAGGTACGCACTG CTGGCGTAGGCTGGCTCACAAATTCACCTGTTTCTTGGGCTGCGATTTAAAGAGCGGGAGTATACCCGATTCGGTCGCGCCTCCACCCTTTGGAGCCTAT
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| DNA Sequence for Gene |
>CF149_21098
ATGGCACGTTGTTTCTGGTGTTCAGAAGACCCGCTGTATGTGGCGTATCACGATCAAGAGTGGGGCGTGCCGTTGCGCGACGCGCATGGGCTGTTCGAGT TGTTATTGCTCGAAGGGTTCCAGGCGGGTTTGTCCTGGATCACGGTTTTAAAGAAGCGCGAGCATTATCGCAAGGTCATGTTCGGCTTCGATGTGCAACG TTTGGCGATCATGAGCGACGCAGAAATAGAAACATTGCTGCAAGATCCGGGGATCATCCGCAACCGTCTCAAGGTGGCTGGCGCACGGCGCAATGCCCAG GCCTGGCTGGCGCTGGAGGACCCGGTGGCGTTCTTGTGGTCGTTCGTGGGGGGCAAGCCGAAGATCAACCACTTCACCGAACGCCATGAATTCCCGGCGG TTACGCCGCAGGCTGAGGCCATGAGCAAAGCCCTGAAAAAAGCCGGTTTTACGTTCGTCGGCCCGACCATCTGCTACGCCTTTATGCAGGCCAGCGGCAT GGTCATGGACCACGCCACCTATTGCGACCGTTACGCCGAACTGGCAAACGGCGGTTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AATGCTGGCCTATTGCATTAAATCCTGTAGTCGCTGCCGAAGGCTGCGATAAGGTCCGAAGGACCTTCAACAATGGGGCTGCTGCGCAACCCATCGCAGC CTCGTACCTCGTCAGCGACTACAAAGCCGTTTTGTTTTGAATGGGAAAACCCTGTGGAAAAGTTTAAAGGCGCCTTGCTGGTCGGGGCTTTGCGATTGTT TGCCATGCTCCCGTGGGGCGCGGTGCAGCGCGTGGGGTCGGCCATCGGCTGGTTGATGTGGAAACTGCCCAATCGATCGCGCGATGTCGTGCGTATCAAT CTGGCCAAGTGCTTCCCCGAGATGGACCCGGTCGCCCGCGAGCAACTGGTGGGCCAAAGCCTCAAGGACATTGGCAAAAGCCTGACCGAGAGCGCGTGTG CCTGGATCTGGCCAGCCCAGCGCTCCATTGATCTGGTGCGGGAAGTCGAAGGCCTGGACGTCCTTAAGGATGCTTTGGCCTCGGGCAAGGGCGTAGTCGG
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| Amino Acid Sequence |
>DNA-3-methyladenine glycosylase I
MARCFWCSEDPLYVAYHDQEWGVPLRDAHGLFELLLLEGFQAGLSWITVLKKREHYRKVMFGFDVQRLAIMSDAEIETLLQDPGIIRNRLKVAGARRNAQ AWLALEDPVAFLWSFVGGKPKINHFTERHEFPAVTPQAEAMSKALKKAGFTFVGPTICYAFMQASGMVMDHATYCDRYAELANGG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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