Pseudomonas sp. CF149, CF149_18791

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CF149 soap_scaffs_149.Contig40, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCCACCAACCTCAACCTTGAGGACATGGTGCGTGATGGTCGCTTCCGTGAAGACTTGCTGTATCGCCTGAACGTGATCACCCTGCATTTGCCACCGTTA CGCGAGCGCAGTGAAGATATCCTCACCCTGGCCGATCGCTTTCTGGCCCGCTTCGTCAAGGAGTACGCCCGACCTGCACGAGGCTTCAGCCAGGATGCCC GTCTGGCGCTGGCCAACTACCGCTGGCCGGGCAATATTCGCGAACTGCGCAACGTGGTTGAGCGCGCGAGTATCATTTGTCCGCAGGAAGTCGTCGAAGT CAGCCACTTGGGCATGGCGGAACAAACCACCCCCAATGCCCCGCGCATCGGTGCCGCACTGAGCCTGGATCAACTGGAAAAAGCCCATATCGGCGCTGTT CTGGCCACCAGCGAAACCCTGGATCAAGCAGCAAAAACCTTGGGCATTGATGCCTCGACGCTGTATCGAAAACGTAAGCAGTACAACCTGTGAGCATCCG
DNA Sequence for Gene
>CF149_18791
ATGAGACTTGCGATCAAGCTGCGTACCCGTCTGTTCCTTAGCATTTCGGCGCTGATTACAGTGGCGTTGCTCGGGCTTTTGCTTGGCGTTGTTGGCGTCA TGCAAATGGCCAAAAGCCAGGAAGCACTGATCCGTAATAACTTCATCACTTTGGACCTGGGCCTTAAGTTGCGTCAGTCACTGGGTGACCAATTGATCCT GATGCTGCGCAACAACCCAGATCCGCAGGCACTGCAAGCCTCCACCCAGGAGTATCAGGCCCTGCTCGAGGAGGGTATCGAGCATGAGCGAAAAAACGAA CTTCACAGCGGCTTTGCTCAGGCACGGGAAGATTACGAGCGCTTTTTACAAGCGTTCCATAAAGCCAGCAGCACATCGCTCAATCTGAGCACTGACAACG AGCTTTCAAGTCGTTTCAATCAGTTGCGCAATGGGCTGATCACTGAGCACCGCCGGGCGCTGGATACTATTTATGCCGCACAGGAAGCCGCCCGTGATCG CGCCATAATCATCGCTTCCCTGCTGGGTCTGGTCGGCCTTGCGGTGCTCATCATCGGCTTTATTACCGCCCATGGCATTGCCAGGCGCTTTGGCGCGCCG ATCGAGGCGCTGGCCAAAGCTGCCGACAATATAGGCAAAGGTAACTTTGAGGTGGTGCTGCCCCTCTCTTCAGCCACTGAAATGAACCTGCTGACACGGC GCTTCGGCACGATGGCCGAAGCTTTGCGCCAACATCAGGCAACCAACATCGACGAGCTGCTGGCGGGCCAGCAACGGCTGCAGGCAGTGCTCGACAGCAT TGATGACGGGTTGTTGATGATCGATCAGCAGGGGCGGCTAGAGCATTTGAATCCAGTGGCACAGCGGCAATTGGGTTGGGATGAAGGCCGTCTTGGCCAG CCACTGGGCGAAGCGTTGCAACGCCCCGAACTCGACCAACAACTGCAAACGGTGCTGCGCGGTGGCAGCCTTGAACGGTTGCCGGAAGACTTGAGCGTCG ACATAGAGGGCGAGAACCGACTTCTGACTTACAGCCTGACTCCGGTCAGCCAACCCAAAGGGCCGATTCTCGGGGCTGTGATGGTGCTCCATGATGTAAC CGAGCAGCGCGCGTTTGAGCGTGTGCGCAGCGAGTTTGTACTGCGCGCGTCCCATGAGCTGCGCACCCCCGTTACCGGTATGCACATGGCGTTCGGGTTA TTTCTGGAGCGTGCGCGCTTTGACCCGCAATCCCGTGAAACCGATTTGCTCAACACCGTAAACGAAGAAATGCAGCGCCTGATGCAGTTGATCAATGACT TGCTGAACTTCTCTCGTTATCAGAACGGCATGCAAAAGCTGACCCTGGCCCCCTGCAACCTTCAACAGATGCTTGAGGACGCAAGTGCCCGCATCGCAGC ACAGGCCGCGGCAAGGCATATCGAGCTAGTGCTCGAACTTCAAGAACCACTGCCTGTGCTTAATGCCGATCAGGCCCAGCTTGAACGTGTGCTGGATAAC CTGCTGGATAACGCCTTGCGCCATACCGCCGATGGCGGGCAGATTCGCCTTCAGGCCCGACGTCATGCTGAGCGGGTGATCATCAGTATCGAAGACAATG GCGAAGGTATTGCCTATAGCCAGCAAGGCCGTATTTTCGAGCCCTTCGTGCAGGTGGGGCGTAAAAAGGGCGGTGCTGGCCTTGGTCTGGCGCTGTGCAA GGAGATTGTGCAATTGCATGGCGGGCGCATTGGGGTGTATTCACGTCCAGGGCAAGGCACGCAGTTTTACATGGCGCTTCCATTGCTGTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCGCACTGGCTTATCAGTACTTTTGCGTGTTCAACACTTTCAAGATTGCCGCACTTTCAGCATCCGGTGTGCCATCGAAAAGCGCGGGCCTGAAACGCA TCTGAAACGCGGCCAATACGTGGCGGGTCGCGACATCCAGCTCGCCGGTTTGCGGAGTTTCATAGCCCAATAGCGCCAGTTGCTGCTGGAACCAGGTGAT GCTCGGCAACGTGCTGGTAAACAATGCTTGCTCACGGGCCACGGCTTGCGCATTTGGCCAGATGCCAAACCCTGCTTCGGCCAGTCGCTTCCAGGGAAAT AGCGGTCCAGGATCGAGCTTGCGCAGGGGGGCTATGTCGCTGTGGCCTATGATGTTGCGCGGATCGATCTTGTAGCGGGTCGAAATGTCTTTAAGCAGCG CGATAAGCGACTGGACCTGACCTTCGGTGTAGGGATACCAGACTCGCCCTTCTGGCGTATCACGAAAACCCTTGTTCACGATCTCAATGCCGATGGAGCT
Amino Acid Sequence
>alginate biosynthesis sensor protein KinB
MRLAIKLRTRLFLSISALITVALLGLLLGVVGVMQMAKSQEALIRNNFITLDLGLKLRQSLGDQLILMLRNNPDPQALQASTQEYQALLEEGIEHERKNE LHSGFAQAREDYERFLQAFHKASSTSLNLSTDNELSSRFNQLRNGLITEHRRALDTIYAAQEAARDRAIIIASLLGLVGLAVLIIGFITAHGIARRFGAP IEALAKAADNIGKGNFEVVLPLSSATEMNLLTRRFGTMAEALRQHQATNIDELLAGQQRLQAVLDSIDDGLLMIDQQGRLEHLNPVAQRQLGWDEGRLGQ PLGEALQRPELDQQLQTVLRGGSLERLPEDLSVDIEGENRLLTYSLTPVSQPKGPILGAVMVLHDVTEQRAFERVRSEFVLRASHELRTPVTGMHMAFGL FLERARFDPQSRETDLLNTVNEEMQRLMQLINDLLNFSRYQNGMQKLTLAPCNLQQMLEDASARIAAQAAARHIELVLELQEPLPVLNADQAQLERVLDN LLDNALRHTADGGQIRLQARRHAERVIISIEDNGEGIAYSQQGRIFEPFVQVGRKKGGAGLGLALCKEIVQLHGGRIGVYSRPGQGTQFYMALPLL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site