Pseudomonas sp. CF149, CF149_17946

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CF149 soap_scaffs_149.Contig39, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGACAGGTCTGGGTCTGGATCAAAGACAAGCAGATGGACAAGGAAAAACTCAAATTACTGCGCGCCGACTCGCCGCTGGGTGAGATTTTGGCAGCGGGTC TGGCCAACTCAAAACATGGTCGCGAGATCATGAAAGAGTGTATCGAAGAGGCCGCTGCCCGGGTGATCCACGAACTTGAGCGTTATCTCAATGCGCTGGG TACGATTGCTGCAATGGCGCCGCTGCTAGGCTTGCTGGGCACCGTACTGGGCATGATCGATATTTTCAGCTCGTTCATGGGGTCGGGCATGACCACCAAT GCTGCCGTGCTGGCGGGCGGTATTTCCAAGGCGTTGATCACCACTGCCGCCGGTCTGATGGTGGGTATCCCTGCAGTCTTCTTCCATCGCTTCCTGCAAC GCCGTGTCGACGAGCTGGTGGTCGGGATGGAACAAGAGGCGATCAAGCTGGTTGAGGTGATACAAGGCGACCGTGAAGTCGATGTGGTCGGGAGCAAAGC
DNA Sequence for Gene
>CF149_17946
GTGAAATTTCGCCGCAAGCCACGGGAAACGGTTGATATCAACCTCGCGTCATTGATTGACGTTGTGTTTATCCTGCTTCTGTTTTTTGTCGTGACTACTA CGTTTACCCGCGAAACCCAGCTGCGCGTCGATCTGCCGGAGGCCGTCAGCGGCTCGCCCAGCGAGGATCAAAGCACCAAGCATCTGGACATCGCCATCAG CGCGGACGGTGTTTTTTCGGTGAACGACCAGTTGTTGCCGAAGAATGATCTGGCGAGCCTGATGGAGGCTCTGCAGAAAGAGTCCGGCGGCGATACCCAA TTGCCACTGTCGATCAGTGCCGATGGCAAAACTCAACACCAGGCGGTCATCACCGCAATGGATGCGGCCGGTAAACTCGGCTTCAGTCATTTGCGCATGA CCACTGTCGAGGCGCAGGCGACTCCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGGCCATGTCCGATCGTTTGTTGCGCGCCTGGTATGCCGGGCATCCGCTGCTGACCCTGCTGCGCCCGCTGGAATGTCTTTACCGTCGCGTGGTTGAGCG CAAGAGAGCGCGTTTTGTGGCAGGAGAGGGCGAAATCTATCGTCCTCCCGTTCCGCTGATCGTTGTGGGCAATATCACTGTGGGCGGCACCGGAAAAACG CCTTTGATCCTCTGGCTGATCGAACATTGCCAGCATCGTGGGCTGCGGGTCGGAGTGGTCAGTCGCGGTTATGGGGCTACGCCACCTCAGTTTCCGTGGC GCGTGAGCGCTGAACAAAGTGCCGCGCAGGCAGGTGATGAGCCTTTACTGATCGTGCAGCGCACCGGCGTACCTCTAATGATCGATCCGGATCGCAGCCG TGCGGTCAAGGCCTTGCTGGCCAGCGAGCAGTTGGACCTGATTCTGTCCGATGACGGTTTGCAGCATTACCGTCTGGCGCGCGATCTGGAATTGGTTTTG
Amino Acid Sequence
>biopolymer transport protein ExbD/TolR
MKFRRKPRETVDINLASLIDVVFILLLFFVVTTTFTRETQLRVDLPEAVSGSPSEDQSTKHLDIAISADGVFSVNDQLLPKNDLASLMEALQKESGGDTQ LPLSISADGKTQHQAVITAMDAAGKLGFSHLRMTTVEAQATP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site