Pseudomonas sp. CF149, CF149_17555 (fabG)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. CF149 soap_scaffs_149.Contig36, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGTCACTTGGTCCAGCCAGTGAATAGCCCCAAAGCCACCTATATAACGGTGCCTGACCGGGTTAAGCACCCAAAAGTCGAAATCATGGGCAGTGTCATAG CCCCTGGCTTCAGGGAAGTAGCGGTAGTAACGCTCAGCGGCAGCTGTAATGGCTGCAGCCTCGGTCAACTGCTCGGCTTCGGCCAGGTACGTCAGGCGCC CAACGGCCTGGACATCTGCAGCCCCACGCTCGCCGACCATCAAGGAGCACTTGGGATCCTTGCGCAGATTATGGGTGTGCTGGGCAATACGGCTGATCAA AATCAGCGGCCGCCCCTGGTCATCCAGGCAGTAAGGCACCACGGAGCCAAACGGAAAACCCGGCATGGCCTTGGACTGGGTCGACAGGGCGCCACGGTAT TCCTTGAGCAGTAATTCTCGGGCATGCTTGGCAGCTTCAACGCTCAACTTATGACTCCTTAATAAAAAATCCGTCGATAACGGTCGAGATCAGGGCACTC
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| DNA Sequence for Gene |
>CF149_17555
|fabG
ATGCAACTTAAAGACAAAGTAATCATTATCACTGGCGGCTGCCAAGGGCTGGGTCGTGCCATGGCTGAGTATCTGGCTGCCAAGGGCGCCAGGCTGGCAC TGGTTGACCTCAATCCGGAAAAGCTCGAATTGGCAGTCGCAGCCTGTCAGGCGCACGGTGTCGAAGCTCGAGCCTACCTGTGTAACGTTGCTGACGAAGA ACAGGTTACGCAAACCGTTGCCCAGATTGCAGAAGATTTTGGTGCGATTAACGGTCTCGTAAACAACGCCGGTATTTTGCGTGACGGTCTGCTGATCAAG GTCAAGGACGGGGTGATGACCAAGATGAGCCTGGCGCAATGGCAGGCGGTAATCGACGTCAACCTGACCGGCGTTTTCCTGTGCACCCGTGAGGTGGCGG CGAAAATGATCGAGCTCAACAGTCAGGGCGCGATTATCAACATTTCGTCGATCTCGCGCGCAGGTAACGTCGGCCAGACCAACTACTCGGCAGCCAAGGC CGGCGTTGCCGCAGCCACGGTGACCTGGGCCAAAGAGTTGTCACGCTACGGCATTCGAGTGGCCGGGATTGCCCCAGGTTTTATCGAAACCGAAATGACC CTGGGCATGAAACCCGAAGCCCTCGAGAAGATGACTTCCGGCATCCCGTTGAAGCGCATGGGCAAAGTTGAAGAAATCGCCCATTCCGCGGCCTACATTT TTGAGAACGACTACTACACCGGGCGGATTTTGGAGCTTGATGGCGGCTTGCGGATCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCCAAACACTGTAGCCGCTGCCGCAGGCTGCGATGGGCGGCGCAGCGGCTACAGATGTATGAGCTATTACCAGGTCACGCCAAACCCCATGGTGTAGCG AGTCTTGTTGAGGGAGTTATCAGAGCCGCTTGAACCACCAATCAGGTCTTTCTCGGCCTTGAGATTGAGCGATGCCCATTCCGTCACCTTGTAACGCAAG CCGATTTCGGAATCGAGGCTGTAGTCCGACGTACTCTCCAGTGACTTGCCCAACTCACCGTTGGTGAAGATCGAAACAGTCTTGCCCATCAAGTAGCGGT TGTAATCCCACTTCATGGCCAGCGAGTAGAAGTTATCTTTCTTGCCGTCTGAATACTCATAGTCCGTGCGGTTGATCAGCGAACCCAGGGAGAATGCACC CAGTTCGTCATCCCAAAACTGATAGCCCGGCCCCGTACCGATGGTGCGCTGGCGGGAAACGTCTTCGACTTTGTCACGGTTATAGGCCAGTCGACCTTGC
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| Amino Acid Sequence |
>3-ketoacyl-(acyl-carrier-protein) reductase
MQLKDKVIIITGGCQGLGRAMAEYLAAKGARLALVDLNPEKLELAVAACQAHGVEARAYLCNVADEEQVTQTVAQIAEDFGAINGLVNNAGILRDGLLIK VKDGVMTKMSLAQWQAVIDVNLTGVFLCTREVAAKMIELNSQGAIINISSISRAGNVGQTNYSAAKAGVAAATVTWAKELSRYGIRVAGIAPGFIETEMT LGMKPEALEKMTSGIPLKRMGKVEEIAHSAAYIFENDYYTGRILELDGGLRI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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