Strain | Pseudomonas sp. CF149 soap_scaffs_149.Contig31, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCGAGCGATCTCGGCAGCACTGATGTTATAGGGCCCGCTATCCGACCAAGCGATGGCCACATAACGGCCCAGCACGAGCTCAGGAACCTGGCGAATGACG TCGCCCAGATTTACGTCGCGTCCATTGTTCCAGGCGAGAGTGCTGTAACCCGCGTGCGTCCCGGTATGTAGTTCAGTTGCCATATAAAATCCTTTGAAGA TCAGCTGTGGAGCAGGTGCGGCGACCTGCCGTTTGGCATCATGTAGAGTCTTTAGCGATACCCGCACCGCAAGCTTACGGGCAAGAGGTCTTGCTCAGAT CAGCCGGCATCCATCCATAGCGGGGGCAATAGATGATTGATCTCACAGGCCTTCTGCGTCATCTGCTCTGCGACCGCCACCTCGTACCAATAGCCCTTTG CCCATGAAAACAGGTTTGGCGCACGACTTCACATTCCGTATCATTCTCCCATCACGCTCATCGTAGCGACCGATCACCCAGCATCATTTTCGGAGGGTTC
|
|
DNA Sequence for Gene |
>CF149_14837
ATGAGCCTGCAAGACCTGAACAACATCCCTGGCGTTACCGCCACCCCTGATAGCGCTACCCAAAACTTCGTGTTCAACCACACCATGTTGCGCGTCAAAA ACATCGAGAAGTCCCTCGATTTTTATACCCGCGTACTGGGCTTTTCACTGGTTGAAAAGCGTGACTTCCCTGAAGCCGAATTCAGTCTGTATTTTCTGGC GCTGGTCGACAAGGCCCAGATCCCGGCAGACGACGCAGCACGCACGCTGTGGATGAAGTCCATCCCCGGCATTCTGGAACTGACCCACAATCACGGCTCG GAAACCGATGACAGCGTCGTCTACCACAATGGCAATACCGATCCCCGTGGTTTTGGCCATATCTGCATTTCGGTGCCGGATATCCGTGCCGCATGCGAGC GCTTTGAAACCTTGGGCGTGGACTTCCAGAAGCGCTTGAACGACGGCCGCATGAAGTCCCTGGCATTCGTTAAAGATCCGGACGGTTACTGGGTAGAAAT CATCCAGCCGCAACCGATGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
ATACCGGACGCAAAAAAAAACCCATGATCGCTCATGGGTTTTTTTATTTGGCTCGCTTATTCAGGCGCAGAAGAGCGGATCAAGTGATCGAACGCACTCA GCGAAGCCTTGGCGCCCTCACCTACCGCGATCACAATCTGCTTGTACGGTACGGTGGTCACGTCACCGGCAGCGAAAATACCGGGGATGGACGTTTCACC GCGAGCATCGACTATGATCTCACCGCGAGGCGAAAGCTCGACCGTACCCTTAAGCCAATCGGTGTTGGGCAACAAACCGATTTGCACAAAGATGCCCTCA AGCTCCACGGTATGCACCTCACCCGACTGCCGATCCTTGTAACGCAGGCCGTTCACTTTCTGCCCGTCGCCAGTCACCTCGGTGGTTTGCGCATGGGTGA TGACCTTCACGTTAGGCAGGCTGTGCAACTTGCGCTGCAATACGGCATCGGCGCGCAACTGGGTATCGAACTCAAGCAGGGTTACGTGGGCAACAATACC
|
|
Amino Acid Sequence |
>lactoylglutathione lyase
MSLQDLNNIPGVTATPDSATQNFVFNHTMLRVKNIEKSLDFYTRVLGFSLVEKRDFPEAEFSLYFLALVDKAQIPADDAARTLWMKSIPGILELTHNHGS ETDDSVVYHNGNTDPRGFGHICISVPDIRAACERFETLGVDFQKRLNDGRMKSLAFVKDPDGYWVEIIQPQPM
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|