Pseudomonas sp. CF149, CF149_13852

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CF149 soap_scaffs_149.Contig26, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGACAGCATCGTTGGGCGCTCAGGCGTGCGATTGTCGGGTGGTCAGCGCCAGCGTCTGGCGATTGCGCGGATGGTGCTGGCCGAGCCCAAGGTGGTGATT CTGGACGAGGCGACCAGCGCCCTGGATGCCGCCACCGAATACAACTTGCATCACGCTTTGGGAAAATTCTTGAGTGGTCGTACTACTTTAATCATCGCTC ATCGTTTGTCTGCGGTAAAACAAGCAGACAGGGTGCTGGTGTTTGATGGCGGCTGCATTGCCGAAGAGGGTGATCACCAGCAATTGATCGCAGAGGGAGG GCTTTACGCCAAACTTTACGGGCATCTGCAACAGACTTGATACAGGCGGTTGTCGTTTAAGGGTGGGGGGCTGCCCAGGTTCGGATTTTTGTCGGTTTGG GGCAATACGGACTGCTCAATTTTTTGAAAATTGGCCTAGGCTGATTTGTAGTGAGATTTTCTCTCTGGTTTTCATCTGACGCCATGAAGCAAGGAAACTC
DNA Sequence for Gene
>CF149_13852
ATGAAACTTAAACGCCCCCATGGGACGCCACGCTTGTTGGGCATTGTTTGGCCCTTTATTGCCGTCGTGCTTTTCCAGGCGCTATTGGGGTGCGTGAGTC TGTATATGCTCTCTGCGGTGCGCAGTTACGTGGGGGGCGAAAGTTTGTGGTCCAAAGGTCAAAAAGACGCCATCTACTTCCTCCACTTGTATTCCGATAC GCAAGACCCTGTTTACTTCAGAAAATTTCAGCAGGCAATAAGTGTCCCTCAAGGCGGTCACACACTACGGCTTGCGATGGATCAATCTCCCCCTGATGTA GTCTCTGCCCGTGAAGGCATTCTGCAAGGTGGCAACAGCGAGCAAGATGTCTCCAGCATCATTTGGTTCTATCGATACTTTCGTAACGTCAGTTATATGA AAACGGCCATCGAGAAGTGGACCCAGGGTGATGCTTATCTGATTCAGCTCGATGAACTGGCTCAAGAAATGCATCGAGCATTGCTTGAGGGTCAGGCCAG CGAAGCGGACGTCAAACGCTGGGAGGACAATATATTTGCCATCAACGAAGGAATTGCCCCCGCAGCCAAGGCCTTCAGCGATGCTCTGGGTGAAGGCTCA CGTTTTATCTGGCAGTTGCTGGTAGCCATCAATCTAGCCACGGCGCTGGGGCTGATTCTTCTGGTGCTCATACGAACTCATAAAGTGCTGGCTCAGAGCC GTGCATTTGCTGAAGCGCTGCAGCTGGAAAAAGAGCGGGCACAAATCACGCTTCAGTCCATTGGCGACGGGGTCATAACGACCGACGTGAATGGTGCTAT TGCCTACTTGAATCCGGCGGCGGAGCAGCTGACCCAATGGAAGTCCGAGCAGGCACAAGGCGTTACCCTGGCGGCGTTGTTCAAGTTGCTGGATGACAAT GATCAGGATGACGGTTTGAAGCTGATTGAACGTATTCTCAGCGGCCAGCTGGGCAACAATCGCGAGCATTCCAGGCAGATTCAACGAATGGACGGCAGTA CCGTCGCGGTCACGCTGGTGGGGGCGCCAATCCTTCACGCCGGGGAGGTGAGCGGCGCGGTGCTGGTGCTGCATGACATGACCCAGGAGCGTCAATACAT CGCCAATCTATCCTGGCAGGCAACCCACGATGCACTTACCGGTTTGGCCAATCGCCGTGAGTTCGAATACCGCCTTGAGTTGGTACTGAAGAATCTGGGC CGACAACAGGGCCGGCATGCACTCATGTTTCTCGATCTGGATCAGTTCAAGCTGGTTAATGACACCTGCGGTCATGCGGCAGGTGACGAGTTGCTACGTC ACATATGTGTGCTGCTGCGAACCGGATTGCGCGAAGGCGACACCCTGGCGAGATTGGGAGGGGATGAGTTCGGCATTTTGCTGGAAAACTGTCCGGTCGA CATGGCGGAAAAAATAGCGGGAGGCTTGCGCCAATCGGTGCAAAGTCTACATTTCGCCTGGAAGGGGCGACCGTTCATGAGCACCATCAGCATTGGTCTG GTCCACATCCATCAAGCCCCCGTGACCCTGGAGGCATTGATGCGTGCTGCAGATATGGCCTGTTACATGGCCAAGGAAAAGGGCCGTAATCGGGTACAGG TTTACCAGGTGGATGACACTGAGCTGTCTTTGCGTTTTGGAGAGATGGCCTGGGTGCAGCGCCTGCACGTAGCCCTGGAAGAGAACCACTTCAGACTGTA TTCACAAGAAATCACTCCCTTGGGGGGGGCTCAGGAAGGCAGTGGGCACATTGAAATCCTGTTGCGATTGAAGGACGAGAGCGGGCGAATGGTTCTGCCT GACAGTTTTATTCCTGCCGCCGAGCGTTATGGTTTGATGAGCTCGATAGATCGCTGGGTGGTCGAAAATGTATTCAGGATCATTTCTGAATGTTCGGCCC AGTCGGGCGGGCGCCCCATGGCGATGTGCGCCATCAACTTGTCAGGCTCGACCATAGGGGATGACGATTTCCTGGCATTTCTGCACGAACAATTTGAATG TTACGCAGTGTCGCCCACGCTTATCTGCTTTGAAATTACCGAAACCAGCGCCATTGCAAACTTGGGCAGTGCGATTCGATTTATTAATGATCTCAAGGCG TTGGGTTGTCATTTTTCGTTAGATGACTTTTGTGCCGGTATGTCTTCGTTTGCTTACTTGAAACATTTGCCCGTCGATTTTTTGAAAATTGACGGCAGCT TCGTAAAAGACATGTTGGATGATCCTATCAACCGGGCCATGGTTGAAGTTATTAATCATATTGGCCATGTCATGGGAAAACGCACCATTGCCGAGTTTGT TGAAAGTACGCAAATAGAGCAGGCGTTGATTGAAATCGGAGTTGATTATGCGCAGGGCTATATAGTTCAGCGCCCGCAGCTGTTTACCTTTGACAGTTTA TTACAGCGCCCTGTGCGTTCCAGATCGTTGACATTGAAGTCGCCGGGAACTTTACGTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TATGTTGTACCTTTTCTAAAGTCTCTTCTCAAAAAGGATTTGGATTGTGATTACTGTATTTAACCGGACAGGGCCTCTCATGGAAGAGGCCAGTTATCCA CAGTGGGCGCAGCAGTTGATTCGCGATTGCAGCGAGAGTAAACGCCGTGCTGTGGGGCATGAAATATATAAACGCATGCGTGATAACACGCTAAGTCCCC GGGCCATGCGAACGTACCTGATAGGCGGCTGGCCGGTCGTTGAGCAGTTTTCGTTGTACATGGGGCGTAACCTGGGGAAAACCCGTTATGGGCGTCACCC GGGTGAGGACATGGCGCGTCGCTGGTTGATCCGAAATATCCGCGTCGAACTCAATCATGCCGATTACTGGGTGTACTGGGCTCGGGCGCATGGCGTGAGC CTTGAAGAATTGAACGCGCAAGACATTCCCGCTGAATTCCAGGCATTGAACGATTGGTGCTGGCATACCTGCGCGACGGACTCACTGGCGGTCGCTATGG
Amino Acid Sequence
>diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
MKLKRPHGTPRLLGIVWPFIAVVLFQALLGCVSLYMLSAVRSYVGGESLWSKGQKDAIYFLHLYSDTQDPVYFRKFQQAISVPQGGHTLRLAMDQSPPDV VSAREGILQGGNSEQDVSSIIWFYRYFRNVSYMKTAIEKWTQGDAYLIQLDELAQEMHRALLEGQASEADVKRWEDNIFAINEGIAPAAKAFSDALGEGS RFIWQLLVAINLATALGLILLVLIRTHKVLAQSRAFAEALQLEKERAQITLQSIGDGVITTDVNGAIAYLNPAAEQLTQWKSEQAQGVTLAALFKLLDDN DQDDGLKLIERILSGQLGNNREHSRQIQRMDGSTVAVTLVGAPILHAGEVSGAVLVLHDMTQERQYIANLSWQATHDALTGLANRREFEYRLELVLKNLG RQQGRHALMFLDLDQFKLVNDTCGHAAGDELLRHICVLLRTGLREGDTLARLGGDEFGILLENCPVDMAEKIAGGLRQSVQSLHFAWKGRPFMSTISIGL VHIHQAPVTLEALMRAADMACYMAKEKGRNRVQVYQVDDTELSLRFGEMAWVQRLHVALEENHFRLYSQEITPLGGAQEGSGHIEILLRLKDESGRMVLP DSFIPAAERYGLMSSIDRWVVENVFRIISECSAQSGGRPMAMCAINLSGSTIGDDDFLAFLHEQFECYAVSPTLICFEITETSAIANLGSAIRFINDLKA LGCHFSLDDFCAGMSSFAYLKHLPVDFLKIDGSFVKDMLDDPINRAMVEVINHIGHVMGKRTIAEFVESTQIEQALIEIGVDYAQGYIVQRPQLFTFDSL LQRPVRSRSLTLKSPGTLR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site